Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq33 111 1e-19 >seq33 Length=1400293 Score = 111 bits (122), Expect = 1e-19 Identities = 132/178 (74%), Gaps = 1/178 (1%) Strand=Plus/Plus Query 20198 TGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGC 20257 || ||||| || | || || || || || || ||| | | |||||||||||||||| | Sbjct 741609 TGAGCATCGCCAATTGTATGGATGAAATCGCCTGGTTTCAAGCCAGTAACATGAGCAATC 741668 Query 20258 ATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCC 20317 || || || || | |||||| ||||| || || || || || |||||||| || | Sbjct 741669 ATGTATGTCAATGAAGCATAGCTTGCAATATTGAATGGTACACCTAAACCCATATCGGCT 741728 Query 20318 GACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATT-GACATAAC 20374 |||| |||||||| ||||| || || ||||||||||| || || |||| |||| ||| Sbjct 741729 GACCGCTGATACAATTGACATGATAGTTCACCGTCAGCAACGTAGAATTGGACAAAAC 741786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441237767509000