Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq565 165 1e-35 seq4242 100 5e-16 >seq565 Length=530 Score = 165 bits (182), Expect = 1e-35 Identities = 188/252 (75%), Gaps = 3/252 (1%) Strand=Plus/Minus Query 208713 TATTTCAGGTTACTGATGAACAGGTGTTTCTCGTGATCTGGTAAAGCCATGTAGTCAATA 208772 || ||||||||||||||||| | ||| |||||||| || || | ||| ||||| || Sbjct 530 TACTTCAGGTTACTGATGAAGATGTGCTTCTCGTGCTCCGGCAGCGCCTGATAGTCGATG 471 Query 208773 CGGTCACGGGAGACATCTACTTCTTCAGGACGCCAGAAGAAAGAAAGTTGTTTCTCAATG 208832 || || || ||||| || || ||||| ||||||||||||||||| || || ||||| || Sbjct 470 CGATCGCGCGAGACGTCAACCTCTTCCGGACGCCAGAAGAAAGAGAGCTGCTTCTCGATC 411 Query 208833 AGTTTCTCAAAGATCTCATACTTCTGTTGGTCGTAACGAGAAACGTTGACGTTTTGACCC 208892 || || |||||||| || || ||||| |||||| |||| | |||||| || || || Sbjct 410 AGCTTTTCAAAGATGTCGTATTTCTGCTGGTCGAAACGGGCAACGTTCACTGACTGGCCG 351 Query 208893 AGGAACATGTGTTCTTGTAATTGATCGTTTTTGTTTTGGTTGAAAGTTGAGTAACCTGAC 208952 | |||||| | |||| | || || |||||||| || |||||| | |||| | | Sbjct 350 AAGAACATCGGCTCTTTCAGCTGGTCATTTTTGTTCTGTGAGAAAGTAGTGTAA---GCC 294 Query 208953 ATGTCTAATTCC 208964 ||| |||| ||| Sbjct 293 ATGACTAAGTCC 282 >seq4242 Length=525 Score = 100 bits (110), Expect = 5e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 16822 AATGTGGCGCTCGTGACAGGGCTCGAACCTGTGACATACGGATTAACAGTCCGCCGTTCT 16881 ||| |||| | |||| || |||||||| |||||||||||||||||||||||||||||| Sbjct 305 AATCTGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCT 246 Query 16882 ACCGACTGAACTACA 16896 ||||||||||||||| Sbjct 245 ACCGACTGAACTACA 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910815662057000