Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq565 197 1e-45 >seq565 Length=530 Score = 197 bits (218), Expect = 1e-45 Identities = 187/239 (78%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 118301 TACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAGTCGATA 118360 ||||||||||| ||||||||||||||||||||||| |||||||| | |||||||| Sbjct 530 TACTTCAGGTTACTGATGAAGATGTGCTTCTCGTGCTCCGGCAGCGCCTGATAGTCGATG 471 Query 118361 CGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTCTCGATC 118420 || || || | |||| ||| |||||||||||||||||||| | || |||||||||||| Sbjct 470 CGATCGCGCGAGACGTCAACCTCTTCCGGACGCCAGAAGAAAGAGAGCTGCTTCTCGATC 411 Query 118421 AGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTGTCTCGCCG 118480 ||||| || || || ||| |||||||||||| | || | ||||||| || || |||| Sbjct 410 AGCTTTTCAAAGATGTCGTATTTCTGCTGGTCGAAACGGGCAACGTTCACTGACTGGCCG 351 Query 118481 AGGAACATCGGCTGAGTCAGGAAATCGAATTTGTTCTGGTTGAAAGTGCTGTAAGACAT 118539 | ||||||||||| |||| || ||||||||| |||||| |||||| ||| Sbjct 350 AAGAACATCGGCTCTTTCAGCTGGTCATTTTTGTTCTGTGAGAAAGTAGTGTAAGCCAT 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477399500893000