Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq27 131 2e-25 >seq27 Length=888252 Score = 131 bits (144), Expect = 2e-25 Identities = 204/292 (70%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 197026 TCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGA 197085 ||||||||||| || || ||||| ||||||||||| || || | || || | Sbjct 754518 TCCTCGTCGCTGAAACCAGTACCAATCTTACAAATACTTTGATATTCTTCATTTTCCTGG 754577 Query 197086 TTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAG 197145 | ||||||||| | | ||| | || || || |||||||| ||||| || || || Sbjct 754578 TCGTAACAGGCTAACAGGAATCCACCATATGTACCCGTTCTTTTTCCACGTCCTTTATAG 754637 Query 197146 CCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGT 197205 ||||||||||| |||| ||||| | || | || ||| || ||||||||| |||||| Sbjct 754638 CCTCCGATAACTACCAAATCCAATGAATCACCAACGCCTGTCAAGTAATCTTTTTTCAGT 754697 Query 197206 TTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTG 197265 || | ||| | | |||||||| || |||||||| || || | | ||||| || || Sbjct 754698 TTCAACCAATTACGTGATCTCTTTGCGATCTCGTAAGTAGCATCTTTGTCCAATGTTTTA 754757 Query 197266 ATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAAGTTTGAA 197317 | ||| | ||| ||||||| |||| || | | |||| || | ||||| Sbjct 754758 ACCATTAGTCCTTCGCAATTGCCCTTGACTGATTCATTCAGAAACGCTTGAA 754809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676522563038000