Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq20575 102 2e-16 seq17783 87.8 4e-12 >seq20575 Length=672 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 324515 GGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTCGAAC 324574 ||||||||||||||| |||||||||| |||||||||||| || |||||| |||||||| | Sbjct 450 GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC 391 Query 324575 CCGTTTAGCTCCAC 324588 ||| |||||||||| Sbjct 390 CCGCTTAGCTCCAC 377 >seq17783 Length=17731 Score = 87.8 bits (96), Expect = 4e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 324511 ATATGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTC 324570 ||| ||||| ||||||||| |||||||||| |||||||||||| || ||||| | |||| Sbjct 17632 ATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCGGCAGTTC 17573 Query 324571 GAACCCGTTTAGCTCCAC 324588 || |||| || ||||||| Sbjct 17572 GATCCCGCTTGGCTCCAC 17555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147230531788550