Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq15209 100 4e-16 >seq15209 Length=568 Score = 100 bits (110), Expect = 4e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 139901 ATCGAAGAAAAACCTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTAT 139960 |||||||| || || | || |||||||| |||||||| ||| | ||||| |||||||| Sbjct 37 ATCGAAGAGAAGCCACTCAAGCCTAAATCCAATTACGCGGTAACCGGCTTGTATTTCTAC 96 Query 139961 AATAACGATGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGA 140013 ||||||||||| |||| | ||||||| ||||| || || |||||||||| Sbjct 97 GATAACGATGTTGTCGAGATTGCTAAGAACATCAAGCCCTCTTCTCGTGGAGA 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701647673972000