Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq898 98.7 2e-16 >seq898 Length=598 Score = 98.7 bits (108), Expect = 2e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 2562 GATCAGATAGCCGAGCGGCTCCACCACGCGACGCAGCGAGCCGATGGTGCCTTTATGCCG 2621 |||||||||||||| ||| |||||||| || ||||| | |||||||| |||||||| Sbjct 384 GATCAGATAGCCGAACGGTTCCACCACCCGGCGCAGAGCCCCGATGGTTCCTTTATGGGC 443 Query 2622 GTGAACGTATTCCGACGCGGCGACCACGCTGCGCTTTGTGGCTTCCGGCCAGCTGGCATC 2681 ||| ||||| ||| | | || ||| |||||| |||| ||||| | || Sbjct 444 GTGGACGTAGAACGAAGAGCGGATCACCGAGCGCTTGACCTCTTCGGGCCACGCCTCGTC 503 Query 2682 CCAGCGGTCAACCGACCAGGCCCAGGCGAGATACGGCAGCAGCTCAACCGGGCAGGTCTG 2741 ||||||||| || ||||||||||| || | | ||||| | |||||||||| | Sbjct 504 CCAGCGGTCCACGGACCAGGCCCAAGCTAATTGGTAAAGCAGGTGCGCCGGGCAGGTGTC 563 Query 2742 CGCGTTCCACAGTTTGCGCAGCGG 2765 || ||| ||| | || ||||| Sbjct 564 CGGGTTGTACAAGGTACGAAGCGG 587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94455739343700