Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq565 165 7e-36 >seq565 Length=530 Score = 165 bits (182), Expect = 7e-36 Identities = 180/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 76563 TACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGGTTCATGTAGTCGATT 76622 ||||||||||| ||||||||||||||||||||||| |||||||| | |||||||| Sbjct 530 TACTTCAGGTTACTGATGAAGATGTGCTTCTCGTGCTCCGGCAGCGCCTGATAGTCGATG 471 Query 76623 CGGTCACGGGTCACGTTAACTTCTTCAGGTCGCCAGAAGAACGCCAGTTGCTTTTCAATC 76682 || || || | |||| ||| ||||| || ||||||||||| | || ||||| || ||| Sbjct 470 CGATCGCGCGAGACGTCAACCTCTTCCGGACGCCAGAAGAAAGAGAGCTGCTTCTCGATC 411 Query 76683 AGCTTCTCGAACTTCGCATGTTTCTGCTGGTCGTAGCGAGAAACGTTCGGTGTCTCTCCG 76742 ||||| || || | | | ||||||||||||| | || | ||||||| || || ||| Sbjct 410 AGCTTTTCAAAGATGTCGTATTTCTGCTGGTCGAAACGGGCAACGTTCACTGACTGGCCG 351 Query 76743 AGGAACATCGGCTGAGTCAGGAAGTTGAATTTGTTTTGGTTGAAAGTGCTGTAAGACAT 76801 | ||||||||||| |||| || |||||| || |||||| |||||| ||| Sbjct 350 AAGAACATCGGCTCTTTCAGCTGGTCATTTTTGTTCTGTGAGAAAGTAGTGTAAGCCAT 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455249479489000