Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_020203.1 Length=37095 Score E Sequences producing significant alignments: (Bits) Value seq18687 221 3e-53 >seq18687 Length=1155 Score = 221 bits (244), Expect = 3e-53 Identities = 352/504 (70%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 20894 AGTGGATCGGTCAGCGTGTCATCAAGGACATGGCGGCCCAGGGCTACCAGATCACCAACA 20953 |||||||||| | ||||| ||||| |||||||||| || |||||| |||||| |||| Sbjct 1155 AGTGGATCGGCGACCGTGTGCTCAAGAACATGGCGGCGCACGGCTACTCGATCACTAACA 1096 Query 20954 AGCTCTTCGAATCGACCGTGGGCGTAAAACGTACCGACATCGAGGACGACAACCTCGGCG 21013 | ||||| ||| | || ||||| || | |||||| |||||| | |||||| Sbjct 1095 AAAAATTCGAGTCGTCGGTAGGCGTTCCTCGCGACTCCATCGAAGACGACGAAATCGGCG 1036 Query 21014 TCTACGGACCGCTCATGCAGGAAATGGGGCGCGCTGCCGGCGCGCATCCCGACGAGCTGG 21073 ||||| ||||| | || ||||| || || || |||| || |||||||| |||| Sbjct 1035 TCTACAAGCCGCTGTTCGCCGAGATGGGTCGAGCCTCCAGCGCCCACCCCGACGAACTGG 976 Query 21074 TCTTCGCCCTGCTCAAGGCCGGCAACGCCAATCTCTGCTACGACGGTCAAAACTTCTTCG 21133 | || | |||||| || ||||| | | | ||||||||||| ||||||||||||| Sbjct 975 TGTTTGGCCTGCTGAAAGCCGGACTGACTACGCAGTGCTACGACGGCCAAAACTTCTTCG 916 Query 21134 ACACCGATCACCCGGTCTATCCGAACGTGGATGGCACCGGCACGGCGACCACCGTTAGCA 21193 || |||||||||| ||||| || | || |||||||| || || | || |||| Sbjct 915 ACGCCGATCACCCTGTCTACCCAGAGACCGACGGCACCGGTACTGCTGTATCGGTCAGCA 856 Query 21194 ACCTGTTC-GCGCCGGCCGCTGATCCGGGGGCGGCCTGGTATCTGCTCGACACCAGCCGC 21252 || | | | |||| | || ||||||||||||||||||| ||| ||| Sbjct 855 AC---TACAAAGACGGC-------ACCGGCCCGGCCTGGTATCTGCTCGATGTCAGTCGC 806 Query 21253 AGCCTCAAGCCGTTGATCTACCAGGAGCGCATGAAGCCGTCGTTCACTTCGATGACCAAG 21312 |||||||| | |||| |||| || || | ||| | ||||||| Sbjct 805 GCAATCAAGCCGATCATCTTCCAGACCCGTCGCAACTATGCCCTCAAAGCAATGACCAGC 746 Query 21313 GAAGACGACGAGCAGGTCTTCATGGCCGACGAGTACCGCTACGGCGTGCGCTCCCGCTGC 21372 ||||| |||||||| |||||| ||||||||||||||| ||||| | ||||| | Sbjct 745 ATGGACGATGAGCAGGTGTTCATGCGCGACGAGTACCGCTATGGCGTCGACGCCCGCGTC 686 Query 21373 AATGTCGGATTCGGTTTCTGGCAA 21396 ||||| || ||||| ||||||||| Sbjct 685 AATGTGGGTTTCGGCTTCTGGCAA 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118547935137150