Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_020839.1 Length=39573 Score E Sequences producing significant alignments: (Bits) Value seq18687 107 5e-19 >seq18687 Length=1155 Score = 107 bits (118), Expect = 5e-19 Identities = 287/440 (65%), Gaps = 9/440 (2%) Strand=Plus/Plus Query 14070 AGCGTCTGCTTGGAGCCGTAGGCCATTTGCCAGAACCCGAAGCCGACATTGGCGCGGGCA 14129 |||| || || || | |||||| | ||||||||| ||||| || |||||| ||||||| Sbjct 636 AGCGGCTCTTTCGAACAGTAGGCGAATTGCCAGAAGCCGAAACCCACATTGACGCGGGCG 695 Query 14130 TCCGTGCCATAGAGGAATTCCTTGTTCATGAAGACGTGGTCATCATCGAGCTTGGTCTTC 14189 || ||||||| || | || | | |||||| || || ||||| || | ||||| | Sbjct 696 TCGACGCCATAGCGGTACTCGTCGCGCATGAACACCTGCTCATCGTCCATGCTGGTCATT 755 Query 14190 GAGACGAACTGGAAGTCCCGGCGCTTCTGCAGGATGATCGGCTTGAGCGCCCGCGTGGTG 14249 | || ||| || || |||| | |||||||||||||| || || || Sbjct 756 GCTTTGAGGGCATAGTTGCGACGGGTCTGGAAGATGATCGGCTTGATTGCGCGACTGACA 815 Query 14250 TCGAGCAGGAACCAGGGCGTCCCCGTGCCGCCACCGGTATTCGAGACGGTGACAGTCTTC 14309 |||||||| |||||| || || |||||| | | || ||| | |||| | Sbjct 816 TCGAGCAGATACCAGGCCGGGCCGGTGCCGTCTTTGTAGTTGCTGACCGATACAGCAGTA 875 Query 14310 CCGTCCTCGTCGAGC---------ACGGGGTGATCGGTGTCGAAGAAGTTCTGACCGTCA 14360 ||| ||||| | || |||||||||| |||||||||||| || ||||| Sbjct 876 CCGGTGCCGTCGGTCTCTGGGTAGACAGGGTGATCGGCGTCGAAGAAGTTTTGGCCGTCG 935 Query 14361 TAGCACTCGGTCGCGAAGCCAAGCTTCAGGAGCTCGAACACGAGCATGTCCCATTTCGAG 14420 ||||||| || | | || ||||| || | ||||| || ||| | | | Sbjct 936 TAGCACTGCGTAGTCAGTCCGGCTTTCAGCAGGCCAAACACCAGTTCGTCGGGGTGGGCG 995 Query 14421 CCGGCGGAGCGGCCCATTTCCTGGAACAGCGGCGAGTAAATCCCGAGATTGTCGGTCTCG 14480 | || || || ||||| || |||||||||| ||| | |||| | |||| ||| Sbjct 996 CTGGAGGCTCGACCCATCTCGGCGAACAGCGGCTTGTAGACGCCGATTTCGTCGTCTTCG 1055 Query 14481 ATATCGTCGCGATCGACGCC 14500 || ||||||| ||||| Sbjct 1056 ATGGAGTCGCGAGGAACGCC 1075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126475230473250