Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq12568 93.3 5e-14 >seq12568 Length=1436 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 139259 TAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTG 139318 || |||||| | |||||||| | ||||| | | ||||||||||| || || ||||| Sbjct 1076 TAATCCATCCGATCCATGATAGACAGCATACATGGCCGACATATTTGCAAGAAGAGCTTG 1017 Query 139319 TGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAG 139378 || || || || ||||| ||||||||||| | | ||| || ||||| | |||||||| Sbjct 1016 AGCCGTACAAATATTACTAGTTGCTTTGTCACGACGAATGTGTTGCTCACGAGTTTGTAA 957 Query 139379 TGCTAA 139384 |||||| Sbjct 956 TGCTAA 951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578821262677000