Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_020866.1 Length=40231 Score E Sequences producing significant alignments: (Bits) Value seq18687 107 5e-19 >seq18687 Length=1155 Score = 107 bits (118), Expect = 5e-19 Identities = 287/440 (65%), Gaps = 9/440 (2%) Strand=Plus/Minus Query 25268 GGCGTCGATCGCGACGATATCGAGACCGACAATCTCGGGATTTACTCGCCGCTGTTCCAG 25327 ||||| ||||||| ||||| |||| | |||| | ||| |||||||||| Sbjct 1075 GGCGTTCCTCGCGACTCCATCGAAGACGACGAAATCGGCGTCTACAAGCCGCTGTTCGCC 1016 Query 25328 GAAATGGGCCGCTCCGCCGGCTCGAAATGGGACATGCTCGTGTTCGAGCTCCTGAAGCTT 25387 || ||||| || || || || | | ||| || ||||| | || ||||| Sbjct 1015 GAGATGGGTCGAGCCTCCAGCGCCCACCCCGACGAACTGGTGTTTGGCCTGCTGAAAGCC 956 Query 25388 GGCTTCGCGACCGAGTGCTATGACGGTCAGAACTTCTTCGACACCGATCACCCCGT---- 25443 || | | || ||||||| ||||| || |||||||||||| |||||||||| || Sbjct 955 GGACTGACTACGCAGTGCTACGACGGCCAAAACTTCTTCGACGCCGATCACCCTGTCTAC 896 Query 25444 -----GCTCGACGAGGACGGGAAGACTGTCACCGTCTCGAATACCGGTGGCGGCACGGGG 25498 | ||||| ||| | |||| | ||| || | | |||||| || Sbjct 895 CCAGAGACCGACGGCACCGGTACTGCTGTATCGGTCAGCAACTACAAAGACGGCACCGGC 836 Query 25499 ACGCCCTGGTTCCTGCTCGACACCACGCGGGCGCTCAAGCCGATCATCCTGCAGAAGCGC 25558 || |||||| |||||||| || || || |||||||||||||| | |||| || Sbjct 835 CCGGCCTGGTATCTGCTCGATGTCAGTCGCGCAATCAAGCCGATCATCTTCCAGACCCGT 776 Query 25559 CGGGACTTCCAGTTCGTCTCGAAGACCAAGCTCGATGATGACCACGTCTTCATGAACAAG 25618 || ||| || | | ||||| | || ||||| || || |||||| | | Sbjct 775 CGCAACTATGCCCTCAAAGCAATGACCAGCATGGACGATGAGCAGGTGTTCATGCGCGAC 716 Query 25619 GAATTCCTCTATGGCACGGATGCCCGCGCCAATGTCGGCTTCGGGTTCTGGCAAATGGCC 25678 || | || ||||||| || ||||||| |||||| || ||||| ||||||||| | ||| Sbjct 715 GAGTACCGCTATGGCGTCGACGCCCGCGTCAATGTGGGTTTCGGCTTCTGGCAATTCGCC 656 Query 25679 TACGGCTCCAAGCAGACGCT 25698 ||| | || || || |||| Sbjct 655 TACTGTTCGAAAGAGCCGCT 636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128580218500350