Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq22268 167 8e-37 seq22045 118 3e-22 >seq22268 Length=656 Score = 167 bits (184), Expect = 8e-37 Identities = 217/294 (74%), Gaps = 7/294 (2%) Strand=Plus/Minus Query 40200 CCGTACTTCCGGGTGACGTACTGGATGACCTCGCCACGACGCCGGTCATC--GAAGTCGA 40257 ||||||||| || ||||| | ||||||| | | || |||| ||| |||||||| Sbjct 312 CCGTACTTCTCGGCCACGTAATCGATGACCCGGTCGCG--GCCGTCCATGCAGAAGTCGA 255 Query 40258 TGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGT 40317 ||||| ||||||||||| || || || ||||| ||||| || ||||| | || | | Sbjct 254 CGTCGAAGTCGGGCATGGA-ACCCGTTCCGGGTTGAGGAA-CGTTCGAACAGCAGGTCAT 197 Query 40318 GCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAG 40377 |||||||| ||||||||||||||| | |||||||| |||||||| ||||| | | Sbjct 196 ATTCCAGCGG-TCGAGGTCGGTGATCTTCTGTACGTAGGCCACCAGCGAGCCGGCACCCG 138 Query 40378 AGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGA 40437 | || || || || || ||| || ||||| | ||| ||||| |||||||||| | Sbjct 137 ACCCACGACCGGGACCTACCGGCACGCCGTTGTTCTTGGCCCACTTGATGAAGTCCATCA 78 Query 40438 CGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGATCTCGTACT 40491 ||| |||||||| ||||| |||||||||||||| || || | |||| ||| Sbjct 77 CGATCAGGAAGTAACCGGGGAAGCCCATCTGGATGATGATATCCAGCTCGAACT 24 >seq22045 Length=722 Score = 118 bits (130), Expect = 3e-22 Identities = 215/309 (70%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 39099 GCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAACCACGCCGTGCGGTACGCGATGAGT 39158 || |||||| || ||||||| ||| ||||| | ||| || || |||| | | || Sbjct 566 GCGGCCATGAACGGTGCCGGGTGGTGGGTCTTGAGCCAGGCTGTCTGGTAGGACACCAGG 507 Query 39159 CCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAAGGGGACCAGCACGTCC 39218 || || || |||||||| | |||||||||| |||| || ||||| | | || ||| Sbjct 506 CCATAGGCGGCCGAGTGAGACTTGTTGAAGCCGTAACCTGCGAACTTCTCTACCAGGTCG 447 Query 39219 CACAC--TGCCTGGATGGCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTC--TGGAA 39274 | | |||| | | | || ||| | || | | || | ||||| || || Sbjct 446 AAGATGTTGCCCGCAAGATCCCCATCGATT--CCATTATTG-GCACAGCCTTCAATGAAA 390 Query 39275 GTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAG 39334 | || || |||||||| |||||||||||||||||||||| ||||| || |||| Sbjct 389 CCGC-CGCGCTGCTTGGCCATTTCCTCGGGCTTCTTCTTGCCCATTGCCCGACGCAGCAT 331 Query 39335 GTCGGCCTGACCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTG 39394 |||||| ||||| ||||||||| ||||| ||||| || | || | |||||||||||| Sbjct 330 GTCGGCGCCACCCAAGGTGTACCCCGCCATCACCTGGGCGATCTGCATCACCTGCTCCTG 271 Query 39395 GTAGATGAT 39403 || | ||| Sbjct 270 ATAAAGGAT 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163277331178050