Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq29 333 2e-86 seq6116 293 2e-74 seq17930 163 3e-35 seq28 159 3e-34 seq193 127 2e-24 seq6000 84.2 2e-11 seq350 82.4 7e-11 >seq29 Length=2096867 Score = 333 bits (368), Expect = 2e-86 Identities = 741/1101 (67%), Gaps = 32/1101 (3%) Strand=Plus/Minus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||| || |||||||| | || | || ||||||||| || | || |||||||||||| Sbjct 938199 TTTGTCAACAGTAAATTGAATTGGATTTGCGGCTGGTCGAGTGCGCAAATAATACATTCC 938140 Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272 ||||| | || || ||| || || | || |||||||| | | ||||| || || Sbjct 938139 TGTTTTGAGACCGGCTTTCCATGCATAAAAATGAATCGAAGTCATTTTTGCGTATGTTGG 938080 Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332 || |||| | | || ||||||||||| ||||||||||| || || |||||| || Sbjct 938079 TTCGGCCACATGCAAATTGAACGATTGACTTTGATCGATGAACGCACCCCGATCAGCAGC 938020 Query 138333 CATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATG 138392 ||| || || ||||| || ||||| ||||| ||||||| ||| ||||| | Sbjct 938019 CATATTGATGGTTGTTTTAACAGATATTTCCCAAACGGTTTTGTATAAATCGCGAATTTC 937960 Query 138393 TCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCAT 138452 | | || ||| || ||||||||||| || | | |||||||| ||| |||| Sbjct 937959 TTGTGGAATTCGTGTGATATTTTGAATTGAACCATAATCGGCAATGATTTCGTTTTTCAT 937900 Query 138453 GTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTG 138512 |||||||| ||| || | | | |||| || || ||||||| || | || || Sbjct 937899 GTCATCGTCCCACATATCGATTTCGGTCAAATCTTTGATCAGATGATGATTGACCACTTG 937840 Query 138513 AAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTC 138572 ||||||||||| | || || ||| ||||| || ||| |||| || || ||||| Sbjct 937839 AAATTCACCGGAAAGAACACGGCGATTATAAATATTTGATGTGTAAGGTTCGAATGATTC 937780 Query 138573 GTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATT 138632 ||||| || ||||| |||||||| | || |||||||| || | || | ||||| Sbjct 937779 ATTGTTGCCGAGAATTTGAGCCGTACTAGCTGTCGGCATTGGAGCGAGTAATAATGAATT 937720 Query 138633 CCGTAAACC--GTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTA 138690 |||| ||| || ||| |||||| || | | | ||| | ||| |||||| | Sbjct 937719 TCGTACACCATGTTTAGCAATTTTCGTT--TTTAATGCAGCCCAATTCCATAAATCGGTT 937662 Query 138691 GGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTAC 138750 || ||||||||||||||||||| ||||| | || || | || || || || Sbjct 937661 GGCGTTTTGTTCCACATATCGTATTGTAAAACACCTTTGCTAACCGGTGATCCATCATAT 937602 Query 138751 GAATCGTATACACCA-AACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTA 138809 | || ||| ||| | ||| | ||||| || || || || | ||||||||||| Sbjct 937601 GTTTCATATGGCCCATCAATCTCG-GCCAATTCACAACTAGCTTCCAAGGCACCATAGTA 937543 Query 138810 AATAGTTTCGGCAATCTGCTGATTGAG---CAATCGGGCCTCGGCGCTCTCGTACGGCAT 138866 ||| |||||| ||| |||||||| || || | ||||| | || || || || || Sbjct 937542 AATCGTTTCGAAAATTTGCTGATTTAGTTTCATT---GCCTCATCACTTTCATATGGAAT 937486 Query 138867 GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCG 138926 || | || |||| || ||||| | ||||| | || | || || || ||||| || Sbjct 937485 TCGCATCAAAATGAATGCATCGGCTAAACCTTGAATTCCAATGCCAACCGGCCGATGACG 937426 Query 138927 CAGATTTGACGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCGATGATTTTGTT 138983 || || || | |||||| | ||||||||||| ||||| ||||||||||| Sbjct 937425 TTTGTTGGAACGTT---CAGCTTCGGGCAATGGATAATAGTTAACATCAATGATTTTGTT 937369 Query 138984 TAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCC 139042 | |||||| || || || || | | |||| | | | |||||||||||||| Sbjct 937368 CAGATTTCGTGTAACGACTTTTGT-GATTTCTTTCAACTTATCAAAATCGTATGT----- 937315 Query 139043 CGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCG 139102 ||||| || || ||||| |||| || ||||| || | || || || | Sbjct 937314 -TTTGTCTGCG-----GT-TACAAACATGTTAACGGCTATCGATGCCAAATTACAAACAG 937262 Query 139103 CCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCG 139162 | | ||| || | || |||| |||||||||| ||| |||||||| || | || | Sbjct 937261 CAATTTCATCAGAACTTGTGAATTCAACAATTTCGGTACATAAATTACTGCATTGAATGG 937202 Query 139163 TACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTG 139222 |||| | || ||||| || ||||| || || || || |||||| | | ||| || |||| Sbjct 937201 TACCAAGGTTCTGTTGGTTACTTTTACGATTGCAGGCGTCTTTGAATAACATGTATGGTG 937142 Query 139223 TGCCAGTTTCCACTTGTGTCT 139243 | |||||||| | ||||| || Sbjct 937141 TTCCAGTTTCGATTTGTGCCT 937121 >seq6116 Length=1078 Score = 293 bits (324), Expect = 2e-74 Identities = 648/966 (67%), Gaps = 28/966 (3%) Strand=Plus/Plus Query 138286 ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAA 138345 ||||||||||||||||| ||||| ||||| || || ||||| ||||| |||||| Sbjct 42 ATGTTAAACGATTGACTTTGATCAATGAATGCACCACGATCGGCAGCCATATTAATTGTG 101 Query 138346 TTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTT 138405 | ||| || ||||| || || || || | ||||| || | | || || Sbjct 102 GTCTTAACGGAGATTTCCCAAACAGTTTTATACAATTCACGGATCTCTTTTGGAATGCGA 161 Query 138406 GCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTAC 138465 | |||||||| || || | | | |||||||| |||| |||| ||||| | || Sbjct 162 GTTATATTTTGGATCGAACCATAGTCGGCAATGATTTCATTTTTCATATCATCATCCCAC 221 Query 138466 AGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCC 138525 | | || | | |||| || || |||| || || | || ||||||||||||| Sbjct 222 ATCTCCAGTTCGGTCAAATCTTTAATCAAATGATGATTGACCACTTGAAATTCACCGGAT 281 Query 138526 AATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGA 138585 || || |||||| ||||||||| ||| | |||||||| ||||||||||| || || Sbjct 282 AAAACACGACGATTGTAAATGTTTGATGTGTACGGCTCAAATGATTCGTTGTTACCAAGG 341 Query 138586 ATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGA 138645 || ||||||||| | ||||| |||||| || | | | ||||| || | ||| || Sbjct 342 ATTTGAGCCGTGCTGGCGGTAGGCATGGGTGCAAGTAGCAATGAATTTCGGACACCATGT 401 Query 138646 AGCTTGATTCGTTCC--TTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCC 138703 | |||| |||| || | | ||| | ||| | ||| | ||| ||||||||| Sbjct 402 TGGGCGATT--TTCCCTTTCAATTCAGTCCAATTCCATAGATCAGTTGGTGTTTTGTTCC 459 Query 138704 ACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACAC 138763 ||||||| || |||| || || || | || || | || | |||||| | Sbjct 460 ACATATCATATTGTAGAATACCTTTGCTGACTGGTGACCCCGCATATGTTTCGTATGGGC 519 Query 138764 CAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAA 138823 | || | || ||||| || ||| || || | |||||||| ||||| |||||| || Sbjct 520 CGAATTTTTCAGCCAATTCACAGCTGGCTTCCAATGCACCATAATAAATGGTTTCGAAAA 579 Query 138824 TCTGCTGATTGAGCAATCG---GGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGA 138880 | || ||||| || | | |||| | || || || || || | || ||| Sbjct 580 TTTGTTGATT---CATTTGAGCCGCCTGTGGACTTTCATATGGATAACGCATCAAAATGA 636 Query 138881 ACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTT 138940 |||| ||||||| ||||| | || | ||| | || ||||| || ||| || || Sbjct 637 ACGCATCGGCCAAACCTTGAATACCAATTCCAATGGGACGATGTCGTTTATT---CGATT 693 Query 138941 TTGCGGCTTCG---ATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGA 138997 || | || ||| | |||||||| || |||||||| |||||||| ||||||| | Sbjct 694 TTTCTGCCTCGGGCAACGGATAATAATTGACATCGATAATTTTGTTCAAATTTCTGGTAA 753 Query 138998 CCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGA 139057 | || || || | | || ||| || |||||| |||| |||| | Sbjct 754 CGACTTTTGTGATGTCTTTCAATTTTTGAAAATCAAATGT------TTTGTTTT-----G 802 Query 139058 CGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGT 139117 || |||||| | || ||| ||||||||| | || || || || ||||| || || Sbjct 803 TGT-GACAAACATATTAACAGCAATCGAGGCCAAATTACAAACAGCAACTTCATCTTTGT 861 Query 139118 CGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTT 139177 || ||||||| || ||||| | ||| ||||||||||| ||| || || | ||| |||| Sbjct 862 CGGTGTATTCAACGATTTCAGTACATAAATTACTACATCGGATAGTGCCAAGATTCTGTT 921 Query 139178 GATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTT 139237 ||||||| |||||||| || ||||||||||| | || ||||||||||| ||||| | || Sbjct 922 GATTGCTCTTTCGGTTGCATGCATCTTTGTACAAGATGTACGGTGTGCCTGTTTCAATTT 981 Query 139238 GTGTCT 139243 ||| || Sbjct 982 GTGCCT 987 >seq17930 Length=2109152 Score = 163 bits (180), Expect = 3e-35 Identities = 168/217 (77%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA- 24761 |||||| || || ||||||| |||||||| || ||||| || || ||||| || |||| Sbjct 1835307 GATGCAAATTTTCGTTAAAACTCTAACCGGCAAGACTATCACACTTGAAGTCGA-GCCAT 1835365 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||||||| | |||| || || || ||||||||||||||||| || || || || | Sbjct 1835366 CCGACACAATCGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGCATTCCACCAGACC 1835425 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 ||||||||||||| |||||||| ||||| |||| ||| | | |||| ||||| | Sbjct 1835426 AACAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACATTGTCCGATTACA 1835485 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 | || ||||||||||| ||| |||| ||||| ||||| Sbjct 1835486 ATATCCAAAAGGAATCAACATTACATTTGGTATTGCG 1835522 Score = 116 bits (128), Expect = 3e-21 Identities = 93/112 (83%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 139132 ATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGG 139191 ||||||| ||||||||||||||||| || || || | ||| ||||||||||| |||||| Sbjct 158733 ATTTCGGTACACAAATTACTACACTGAATAGTGCCAAGATTCTGTTGATTGCTCTTTCGG 158792 Query 139192 TTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCT 139243 || || ||||||||||| | || ||||||||||| ||||| | ||||| || Sbjct 158793 TTGCATGCATCTTTGTACACGATGTACGGTGTGCCTGTTTCAATTTGTGCCT 158844 >seq28 Length=2173237 Score = 159 bits (176), Expect = 3e-34 Identities = 166/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| || ||||||| || || ||||| ||||| || |||||||| ||| | Sbjct 1269776 ACCATGCAGATTTTCGTTAAAACCCTCACGGGTAAGACTATCACTCTCGAAGTCGAACCG 1269835 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | |||| || || || ||||||||||| |||||||| || || ||| Sbjct 1269836 TCAGACACTATCGAAAATGTCAAGGCCAAAATCCAAGACAAGGAAGGAATTCCACCAGAT 1269895 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGAT 24877 ||||||||||| |||||||| || ||||| |||| ||| ||| ||| |||| || Sbjct 1269896 CAACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGTCG---TACATTGTCCGAC 1269952 Query 24878 TATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 || ||||||||||||||||| ||||| || ||||| Sbjct 1269953 TACAACATTCAAAAGGAATCAACACTCCATTTGGT 1269987 >seq193 Length=1219868 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| || ||| | ||||| | ||||| ||||| || || | || || ||| | Sbjct 521916 ACCATGCAAATTTTTGTGAAAACATTGACCGGAAAAACCATCACTTTGGAGGTCGAACCA 521857 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | |||| || || ||||||||||||||||||||||| || || || Sbjct 521856 TCAGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATTCCACCAGAC 521797 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 ||||| |||||||| |||||||| ||||| |||| ||| | | || || ||| Sbjct 521796 CAACAGCGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGTCGTACTTTGAGCGACTAT 521737 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||||||||| ||||| || | || ||||| ||||| Sbjct 521736 AACATTCAAAAAGAATCAACTTTGCATTTGGTATTGCG 521699 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| | || || ||||| || || | ||||| ||| | | Sbjct 520792 ATGCAAATCTTTGTCAAAACATTGACTGGAAAAACCATCACATTGGAAGTTGAACCATCA 520733 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||||||||||||||| || || || |||||| Sbjct 520732 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 520673 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| || ||||| |||||| | || || | | | || || |||||| Sbjct 520672 CAGCGTTTGATTTTCGCCGGTAAACAGTTAGAAGACGGTCGCACTTTATCCGACTATAAC 520613 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| ||||| ||| | || ||||| Sbjct 520612 ATTCAAAAAGAATCAACATTGCATTTGGT 520584 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| | || || || || || || | ||||| ||| | | Sbjct 521685 ATGCAAATCTTTGTCAAAACATTGACTGGCAAGACCATCACATTGGAAGTTGAACCATCA 521626 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||||||||||||||| || || || |||||| Sbjct 521625 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 521566 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| || ||||| |||||| | || || | | || || |||||| Sbjct 521565 CAGCGTTTGATTTTCGCCGGTAAACAGTTAGAAGACGGTCGTACTTTGAGCGACTATAAC 521506 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| ||||| ||| | || ||||| Sbjct 521505 ATTCAAAAAGAATCAACATTGCATTTGGT 521477 Score = 114 bits (126), Expect = 1e-20 Identities = 158/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| | || || || || || || | ||||| ||| | | Sbjct 521457 ATGCAAATTTTTGTCAAAACATTGACTGGCAAGACCATCACTTTGGAAGTTGAACCATCA 521398 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||||||||||||||| || || || |||||| Sbjct 521397 GACACCATCGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 521338 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACA-TGTCAGATTAT 24880 || |||||||| || ||||| ||||| |||| || ||| ||| || || || Sbjct 521337 CAGCGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGTCG---TACATTGAGCGACTAC 521281 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| |||||||| ||| | || ||||| ||||| Sbjct 521280 AACATTCAGAAGGAATCAACATTGCATTTGGTCTTGCG 521243 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| | || || ||||| || || | ||||| ||| | | Sbjct 521229 ATGCAAATTTTTGTCAAAACATTGACTGGCAAAACCATCACTTTGGAAGTTGAACCATCA 521170 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||||||||||| || || || || |||||| Sbjct 521169 GACACCATCGAAAACGTTAAGGCCAAGATCCAAGACAAAGAGGGTATTCCACCAGATCAA 521110 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||| ||||| || ||||| |||| ||| | | || || || ||| Sbjct 521109 CAACGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTGAGCGACTACAAC 521050 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || | || ||||| ||||| Sbjct 521049 ATTCAAAAAGAATCAACTTTGCATTTGGTATTGCG 521015 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| | ||||| ||||| || || | || || ||| | | Sbjct 520287 ATGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACTTTGGAGGTTGAACCATCA 520228 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || || ||||||||||||||||| || || || |||||| Sbjct 520227 GACACCATCGAAAACGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCGCCAGATCAA 520168 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| |||||||| || || |||| ||| | | || || ||||| Sbjct 520167 CAGCGTTTGATTTTTGCCGGCAAGCAATTGGAAGATGGCCGTACATTGAGCGACTATAAT 520108 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || ||||||||||| ||| | || ||||| Sbjct 520107 ATCCAAAAGGAATCAACATTGCATTTGGT 520079 Score = 102 bits (112), Expect = 7e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||||||||| || || || ||||||||||| ||||| ||||| || ||| Sbjct 520936 AAGATCCAAGACAAAGAAGGTATTCCACCAGATCAACAACGATTGATTTTTGCTGGTAAA 520877 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| ||| | | || || |||||||||||||| ||||| || | || Sbjct 520876 CAATTGGAAGATGGTCGTACTTTGAGCGACTATAACATTCAAAAAGAATCAACTTTGCAT 520817 Query 24908 TTGGTGTTGCG 24918 ||||| ||||| Sbjct 520816 TTGGTATTGCG 520806 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||||||||||||||| || || || || ||||||||||| ||||| ||||| || ||| Sbjct 520431 AAGATCCAAGACAAAGAGGGTATTCCACCAGATCAACAACGATTGATTTTTGCTGGTAAA 520372 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| ||| | | || || || ||||||||||| ||||| || | || Sbjct 520371 CAATTGGAAGATGGTCGTACTTTGAGCGACTACAACATTCAAAAAGAATCAACTTTGCAT 520312 Query 24908 TTGGTGTTGCG 24918 ||||| ||||| Sbjct 520311 TTGGTATTGCG 520301 >seq6000 Length=1279 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 24803 GAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCG 24862 ||||| ||||| || |||||||| |||||||| |||||||| || || |||| ||| Sbjct 1279 GAAGGTATACCACCAGATCAACAGCGTTTGATTTTTGCCGGCAAGCAATTGGAAGATGGC 1220 Query 24863 AGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 | | || || ||||| || ||||||||||| ||| | |||||||| ||||| Sbjct 1219 CGTACATTGAGCGACTATAATATCCAAAAGGAATCAACATTGCACTTGGTCTTGCG 1164 >seq350 Length=253124 Score = 82.4 bits (90), Expect = 7e-11 Identities = 224/340 (66%), Gaps = 25/340 (7%) Strand=Plus/Minus Query 98705 ACCAATGATTCCGCAACCAAGACGTCCTCCAGAATTACCTGTGGTTTTGCTCAGAGGGTG 98764 |||||||| |||||||||| || | |||| ||| || || |||||||||| || Sbjct 74150 ACCAATGACACCGCAACCAATGCGAGCGCCAGCATTTCCGGTAGTTTTGCTCAATTCATG 74091 Query 98765 ATCAGTGAGACCTAAATCGTCACGATTCGTATGTACGACCAGGCTTCTTCCGAGTACGTT 98824 || | ||| ||||| ||| || | ||| || || | | | ||| || | | Sbjct 74090 GCCACCCAAACCCAAATCATCAACATCAGCATGAACAACAACCGTACGTCCAAGAATACT 74031 Query 98825 ATTTGGTCCGTACAAAG---TTACCGAATTGCTGATA---ATTTTCACGGGTGTTAACGC 98878 |||||| || | ||| | | | ||||| ||||||| ||||| | ||| | Sbjct 74030 ATTTGGCCCATTCAATGAAATCAACGAATCGCTGATATTAATTTTAGC-------AACAC 73978 Query 98879 -ATTAGACACTTTGGCCTCGACGTTACCCAGATCTCCTAAATGTTTGACGG----CAGCG 98933 ||| | | ||||| || || || |||| ||| || | ||| ||| |||| Sbjct 73977 CATTTG---CATTGGCTTCAACATTTCCCAAATCACCAACATG----ACGATTATCAGCA 73925 Query 98934 TCGGGCGCGCCGTGATCTTGGCCGAACGGATTAAAATGTTCCCCCGCTGAGGTGCAACCG 98993 ||||| || || || |||| | | |||||||||||| || || || || ||||| Sbjct 73924 TCGGGTGCACCATGCTCTTTGTTGGTTGGATTAAAATGTGGACCGGCCGATGTACAACCA 73865 Query 98994 TTGCTTGTGTCTCCGAATTCGTGAATATGAAAACCATGTT 99033 || | |||| || ||||| || |||||||| ||||||| Sbjct 73864 TTTGTATTGTCACCAAATTCATGGATATGAAATCCATGTT 73825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449759959453000