Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_022066.1 Length=108297 Score E Sequences producing significant alignments: (Bits) Value seq21716 107 1e-18 >seq21716 Length=743 Score = 107 bits (118), Expect = 1e-18 Identities = 235/339 (69%), Gaps = 20/339 (6%) Strand=Plus/Plus Query 95012 CGTCGGATACGAAAGCGCCCTGTATCCGGAT-GGCACCCCGCGCCCCCACGGGCAGGAAT 95070 ||||||| ||||| ||||| |||| |||||| |||| | | ||| ||| || | | Sbjct 410 CGTCGGACACGAA-GCGCCATGTACCCGGATCGGCAGGCTGGTGCCCGGCGG-CATGTAG 467 Query 95071 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGAT----CACCCG 95126 | | |||||| |||| || |||||||| ||||||| ||| | ||| | | | Sbjct 468 AGCATGTCACCGTGGCCCAGCAGTTGCTCGGCGCCGCCCTGGTCGATGATGGTGCGCGAG 527 Query 95127 GCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAG 95186 | ||| || ||| | ||| |||| | | | ||| | ||||| ||||| || Sbjct 528 TCGATCT-TGCTCGATACC-TGG--AACGCCATCGG-GTCGGGATGTTGGCCTTGATCAG 582 Query 95187 GCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGC 95246 || |||| || ||||| || || ||||| || || || | | ||||||||||| || Sbjct 583 ACCGGTGATCACGTCCACCGACGGGCGCTGGGTGGC-AGAATCAAGTGAATACCGGCCGC 641 Query 95247 GCGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCGACTTCTTTCTTGTAGCCGCCC 95304 ||||||||||| ||||| || | || ||| | ||||| | ||||| | || | Sbjct 642 CCGCGCCTTCTGCGCGATACGCGCGATCAGTT--CTTCGACCT---TCTTGCCGACGATC 696 Query 95305 ATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATG 95343 ||||| | ||| |||| |||||| ||||||||||||||| Sbjct 697 ATCATCATGTCGGCGAATTCGTCCACCACTACCACGATG 735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346322265032550