Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq21716 89.7 4e-13 >seq21716 Length=743 Score = 89.7 bits (98), Expect = 4e-13 Identities = 130/180 (72%), Gaps = 8/180 (4%) Strand=Plus/Plus Query 95671 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95730 ||| | ||||| ||||| || || |||| || ||||| || || ||||| || || || Sbjct 562 CGGGATGTTGGCCTTGATCAGACCGGTGATCACGTCCACCGACGGGCGCTGGGTGGC-AG 620 Query 95731 GACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCG 95788 | | ||||| ||||| || ||||||||||| ||||| || | || ||| | ||| Sbjct 621 AATCAAGTGAATACCGGCCGCCCGCGCCTTCTGCGCGATACGCGCGATCAGTT--CTTCG 678 Query 95789 ACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATG 95848 || | ||||| | || |||||| | ||| || | ||||| ||||||||||||||| Sbjct 679 ACCT---TCTTGCCGACGATCATCATCATGTCGGCGAATTCGTCCACCACTACCACGATG 735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351642277657475