Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq21534 269 4e-67 seq18623 89.7 8e-13 >seq21534 Length=584 Score = 269 bits (298), Expect = 4e-67 Identities = 338/456 (74%), Gaps = 12/456 (3%) Strand=Plus/Minus Query 35452 GGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGT 35511 |||| || || ||||||||| || || ||||||||||||||||| || | ||| || Sbjct 568 GGGTGACGCCACGCTGGCCCTGATACTTGCCGCCGCGATCCTTGTAGGACACTTCACATG 509 Query 35512 CCTCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCG 35571 |||||| || | ||||||||||||||||| |||||||| ||||| | ||||| Sbjct 508 GCTCGTCCGACTGCAGGAACAGCATCTGCGCCACCCCTTCGTTGGCGTAGATCTTCGCCG 449 Query 35572 GCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCG 35631 |||| |||| |||||| ||||||||| ||||| || |||||||| ||||| ||||||| Sbjct 448 GCAG--TGGTGGTGTTGGAGAACTCCAGCGTCACGTGGCCTTCCCATTCAGGCTCCAGCG 391 Query 35632 GCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGA 35691 | ||||||||||||||||| || || ||||| ||||||||||| |||| || | | Sbjct 390 GGGTCACGTTGACGATGATGCCGCAACGCGCATAGGTGCTCTTGCCCAGGCAGATGGTCA 331 Query 35692 GGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCG 35751 | |||| |||||| ||||||||||| || || ||||||||||| || ||| ||| |||| Sbjct 330 GCACGTCGCGCGGGATGCGGAAGTACTCCACGGTGCGTGCCAGTGCAAAGGAGTTGGGCG 271 Query 35752 GAATCAGGATGC---TGTCAGCCTTAACCGGCTGC-AGGCACTTGGGATCGAAGTTCTTC 35807 | || ||||| ||| ||| | | | | | || || ||||||||||||| Sbjct 270 GGAT---GATGCACACGTCGCTCTTGA-TGTCGACGAAGCTGCCGGCATCGAAGTTCTTC 215 Query 35808 GGATCAACCACTGCGCTGTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCA-CGCAC 35866 || || || || |||||| ||||||||||| | | || ||||| ||| ||||| Sbjct 214 GGGTCGACGGTGGCCGAGTTGATATTGGTGAAGACCTTGAATTCGTCGGC-GCAGCGCAC 156 Query 35867 GTCATAACCATACGACGAGTTGCCGTACGAGATAAC 35902 ||| || || || ||| |||| | ||||| || Sbjct 155 GTCGTAGCCGTAGCTCGAAACGCCGAAAGAGATGAC 120 >seq18623 Length=675 Score = 89.7 bits (98), Expect = 8e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 122605 CGGGTCGTTAGCTCAGTTGGTAGAGCATGGCGCTTTTAACGCCGTGGTCGTTGGTTCGAG 122664 ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| Sbjct 449 CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAA 390 Query 122665 TCCAACACGACCCACCA 122681 ||| ||||||||||||| Sbjct 389 TCCCACACGACCCACCA 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825664121079000