Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_022750.1 Length=33628 Score E Sequences producing significant alignments: (Bits) Value seq10355 232 1e-56 >seq10355 Length=764 Score = 232 bits (256), Expect = 1e-56 Identities = 331/462 (72%), Gaps = 3/462 (1%) Strand=Plus/Minus Query 18799 TGCTGATGCCCGGTTATGAGTTTGCGCAGAAAAACTCAGAATTGCAGGCCGTGCTCGGAG 18858 |||| | ||| || || || || |||| | ||||| ||||||| |||||| Sbjct 486 TGCTCAAGCCGGGATACGACTTCGCGCTGGCTAACTCCACGCTGCAGGCAACGCTCGGCC 427 Query 18859 TGGCAAAAGACTCCGCCGAAATGACCGCACTACGCAAACAGGCGCGCCAGC-TCGGCGAC 18917 | | |||| ||| || || | | || |||| ||||||||| ||| |||| || Sbjct 426 TTGATAAAGGCTCGGCAGAGTTTCAGTCCCTGCGCACGCAGGCGCGC-AGCATCGGTGAT 368 Query 18918 AATACCGCCGCCTCGGCGGATGATGCGGCCGGTGCACAGATAATCATCGCGAAAGCGGGT 18977 || || ||||| ||||| | ||||| || || ||||| || ||||| ||| |||| Sbjct 367 AACACAGCCGCATCGGCCAACGATGCCGCGCAGGCGCAGATCATTATCGCTAAATCGGGC 308 Query 18978 GGGGATGTTGATGCCATTCAGGCGGCAACGCCGGTCACGCTGAATATGGCGCTGGCGAAC 19037 || || || | ||| ||||||||||||| || |||||| ||||| ||||||| ||| Sbjct 307 GGTAGCGTGGACGACATCAAGGCGGCAACGCCAGTGACGCTGGATATGTCGCTGGCAAAC 248 Query 19038 CGCCGCACGATGGAAGAAAACGCCGCCCTGCTGATGGGGATGAAATCCGCCTTTCAGCTT 19097 |||||||||||||||| |||| | ||||||||| | | ||| ||||||| || Sbjct 247 AATCGCACGATGGAAGAAAGCGCCTCGCTGCTGATGAGTACCAAAAACGCCTTTGGCCTG 188 Query 19098 TCAAACGATAAGGTCGCTCATATCGGGGATGTTCTCTCCATGACGATGAACAAAACCGCC 19157 | ||| |||| || ||| |||| || || || | ||| ||||||| |||||| Sbjct 187 GCTAACAGCGAGGTGGCCCATCTCGGCGACGTGATCAGCGCAACGCTGAACAAGACCGCC 128 Query 19158 GCCGATTTTGACGGCATGAGCGATGCGCTGACCTATGCCGCACCTGTGGCAAAAAATGCC 19217 || | ||||||||| ||||||||||||||||||| |||||| ||||| |||| || Sbjct 127 GCAAACTTTGACGGCCTGAGCGATGCGCTGACCTACATCGCACCAGTGGC-GAAAACGCG 69 Query 19218 GGTGTCAGCATTGAAGAAACCGCCGCAATGGTCGGGGCACTG 19259 || |||||| | || | ||| |||||||| | || |||||| Sbjct 68 GGCGTCAGCGTCGAGCAGACCACCGCAATGATTGGCGCACTG 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107456759620500