Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_024354.1 Length=149162 Score E Sequences producing significant alignments: (Bits) Value seq565 201 1e-46 >seq565 Length=530 Score = 201 bits (222), Expect = 1e-46 Identities = 188/239 (79%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 119073 TACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAGTCGATA 119132 ||||||||||| ||||||||||||||||||||||| |||||||| | |||||||| Sbjct 530 TACTTCAGGTTACTGATGAAGATGTGCTTCTCGTGCTCCGGCAGCGCCTGATAGTCGATG 471 Query 119133 CGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTCTCGATC 119192 || || || | |||| ||| |||||||||||||||||||| | || |||||||||||| Sbjct 470 CGATCGCGCGAGACGTCAACCTCTTCCGGACGCCAGAAGAAAGAGAGCTGCTTCTCGATC 411 Query 119193 AGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTGTCTCGCCG 119252 ||||| || || || ||| |||||||||||| | || | ||||||| || || |||| Sbjct 410 AGCTTTTCAAAGATGTCGTATTTCTGCTGGTCGAAACGGGCAACGTTCACTGACTGGCCG 351 Query 119253 AGGAACATCGGCTGAGTCAGGAAGTCGAATTTGTTCTGGTTGAAAGTGCTGTAAGACAT 119311 | ||||||||||| |||| ||| ||||||||| |||||| |||||| ||| Sbjct 350 AAGAACATCGGCTCTTTCAGCTGGTCATTTTTGTTCTGTGAGAAAGTAGTGTAAGCCAT 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477044409562000