Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq186 98.7 1e-15 >seq186 Length=1299905 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 140537 TGAAAACGATCTTTTAAAAGATCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTAT 140596 |||||| ||||| ||| | ||||||||||| || || || |||||||| || |||||| | Sbjct 150866 TGAAAATGATCTGTTATATGATCAACGCGGCTCGCCAGCCTATATTTCGCCCGATGTTCT 150807 Query 140597 CAGCGGTAAACCATATTTAGGTAAACCGTCTGATATGTGGGCGCTTGGAGTAACATTGTA 140656 | |||||||||||| || |||||| ||| | ||||| ||||| || | | Sbjct 150806 TTGTGGTAAACCATATAAGGGAAAACCGAGTGACCTCTGGGCACTTGGTGTTGTTCTTTT 150747 Query 140657 TACCATGTTGTTTGGGCAATTTCCATTTTATGATGCGTCTCCAACAGAGCTCTTTAGAAA 140716 | ||||| | | | ||||| ||||||| || | | ||| | | | |||||||| Sbjct 150746 CATGATGTTATATCGCCAATTCCCATTTTTCGAATCAACACCAGCGGCTTTGTTTAGAAA 150687 Query 140717 AATAAAGTCAGGCGTATTTACAATACCAA 140745 ||| || || | || || || || |||| Sbjct 150686 AATCAAATCTGCCGAATACACCATTCCAA 150658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704366841822000