Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_024486.1 Length=43734 Score E Sequences producing significant alignments: (Bits) Value seq17930 80.6 7e-11 >seq17930 Length=2109152 Score = 80.6 bits (88), Expect = 7e-11 Identities = 124/175 (71%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 1377 TACGGCAGAATAGCTCCAAGATCCGGTCTAGC--GGCAAAGTATTCAATTGATGTGGGCG 1434 |||||| | | || |||||||| || ||| | || ||| |||| | ||||| |||| Sbjct 911631 TACGGCCGCGTTGCACCAAGATCTGGCCTAACATGGAAAA--ATTCTCTCGATGTTGGCG 911688 Query 1435 CTGGAGTTATTGACCCTGATTATCGTGGAAGTATCAGTGTTGTTTTATTTAATCATTCGG 1494 |||| ||||| || | ||||||||||| | | | |||| ||||||| |||||||| | Sbjct 911689 CTGGTGTTATCGATCAAGATTATCGTGGCAATTTGGGTGTGATTTTATTCAATCATTCCG 911748 Query 1495 ATGTGCCTTTCCATGTGTCGAGGGGAGACAGAATAGCTCAGTTAATTTGTGAGCG 1549 ||| ||| | ||| | || || | || ||||| || |||||||| || Sbjct 911749 ATGATGATTTTGAAGTGAAAAAAGGTGATCGCATTGCTCAATTGATTTGTGAACG 911803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139786560535200