Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq17930 91.5 1e-13 >seq17930 Length=2109152 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 ||||||| || || || || || |||||||||||| || || | | | || || | Sbjct 1835513 AAATGTAATGTTGATTCCTTTTGGATATTGTAATCGGACAATGTACGGCCA-TCTTCCAA 1835455 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || || || || |||| | || || ||||| || || |||||||| ||||| ||| Sbjct 1835454 TTGTTTACCGGCAAAAATCAAACGTTGTTGGTCTGGTGGAATGCCTTCTTTGTCTTGGAT 1835395 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||||| | || | ||||||| ||||| || || | |||| || ||||| Sbjct 1835394 TTTAGCCTTGACATTTTCGATTGTGTCGGATGGCTCGACTTCAAGTGTGATAGTCTTGCC 1835335 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| |||||||| |||||||| ||||| Sbjct 1835334 GGTTAGAGTTTTAACGAAAATTTGCAT 1835308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483272903449000