Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_024792.1 Length=160281 Score E Sequences producing significant alignments: (Bits) Value seq33 84.2 2e-11 >seq33 Length=1400293 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 147810 TAGGAGTACCCTTCAATATCGCAAGCTACGCACTATTGACTCACCTTATCGCAAAGATGA 147869 |||| ||||| |||||||| |||||||| || |||||| || | || || | | | Sbjct 741714 TAGGTGTACCATTCAATATTGCAAGCTATGCTTCATTGACATACATGATTGCTCATGTTA 741655 Query 147870 CAGGATTAAAACCCGGAAAATTCATCCATACCTTCGGTGACGCTCATATCTATAACAACC 147929 | || || ||||| || | ||||||||||| | || || |||||| | ||| ||| | Sbjct 741654 CTGGCTTGAAACCAGGCGATTTCATCCATACAATTGGCGATGCTCATGTTTATCTCAATC 741595 Query 147930 ATATTGAAGCAGTAAA 147945 |||||||| || |||| Sbjct 741594 ATATTGAACCATTAAA 741579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512614324061000