Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_025446.1 Length=157308 Score E Sequences producing significant alignments: (Bits) Value seq4242 82.4 8e-11 >seq4242 Length=525 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 76386 TTCAATTTGGCGACGATGGCAGGACTTGAACCTGCGACATATGGATTAACAGTCCACCGT 76445 || ||| |||| | || | ||||| ||||| | |||||| ||||||||||||| |||| Sbjct 308 TTAAATCTGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGT 249 Query 76446 TCTACCGACTGAACTACA 76463 |||||||||||||||||| Sbjct 248 TCTACCGACTGAACTACA 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503103634628000