Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_027384.1 Length=37359 Score E Sequences producing significant alignments: (Bits) Value seq4505 100 7e-17 >seq4505 Length=835 Score = 100 bits (110), Expect = 7e-17 Identities = 223/332 (67%), Gaps = 2/332 (1%) Strand=Plus/Minus Query 465 GATAGGCCGGGTTAGCACTGATGATCGCGAGGCCGCCATTGATCTGCCGTTGGACGCGCT 524 |||| |||| ||| || ||||||| | || ||||| | |||||| ||||| | |||| Sbjct 428 GATAAGCCGTGTTGGCGCTGATGACCAAGACCCCGCCGTCGATCTGGCGTTGCAGCCGCT 369 Query 525 TGGCGTACAAGTGGTCATCCAGGCGGATGACGTAGACAGCTTCGTCACGAACCTCATTGC 584 ||||||||| | ||||||||||||| || || || | || ||| | | | || | Sbjct 368 TGGCGTACAGGAGGTCATCCAGGCGTATCACATAAAACGCCTCGCCCTGGATGGTGTTCC 309 Query 585 AACTGTGGTCAATCATCACCGTATCGCCATCGCTCAACAGTGGCTCCATTGAGTCACCGC 644 | || | |||||| |||||||| || | | | ||||| ||||||| || Sbjct 308 GGGAAAGATCCACCATCACGGTATCGCCGTCCTTTAGAAACGGCTCGTTTGAGTCGCCAT 249 Query 645 CGATGCGGACGGCCGACATATTCG-CGATCTCCAGGCCTTGCTTCCGCAAGCTGTAGCGA 703 | | || || || | | | || || | | ||| |||| ||| |||||||||| | Sbjct 248 CCACCCGCACCGCTGCGAGCTGCGACGCT-TGCAGCCCTTTTTTCTGCAAGCTGTATTTA 190 Query 704 GTGAATGCCAACTGAGCGAGTATCCGCGCCCCCTCTGTCCAGGAGCCGTGACCAGCGCTC 763 ||||| || | | | || || || || || || |||| | ||||| || ||| Sbjct 189 GTGAAGGCAAGCATTGTCAGGATGCGAGCGCCATCGCTCCAAGCACCGTGGCCCTGGCTG 130 Query 764 ACCCGAGCGTCATACAGAGGGATATAGGCGTA 795 | | ||||||||||| || | ||||||||| Sbjct 129 ATTCTGGCGTCATACAGCGGAACATAGGCGTA 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119392489603950