Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq33 86.0 6e-12 >seq33 Length=1400293 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 31155 TTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTCT 31214 ||| || ||||||| ||||| ||| ||||||||||| | || | || || |||||| | Sbjct 741587 TTCAATATGATTGAGATAAACATGAGCATCGCCAATTGTATGGATGAAATCGCCTGGTTT 741646 Query 31215 TAGATGGGTCAATTTGGCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAATGG 31274 | || | | ||||||| | ||| ||||| || || || |||||||| Sbjct 741647 CAAGCCAGTAACATGAGCAATCATGTATGTCAATGAAGCATAGCTTGCAATATTGAATGG 741706 Query 31275 TACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTCCGGT 31334 |||||| || |||| |||||| || || ||||| || ||| || |||||| | | | Sbjct 741707 TACACCTAAACCCATATCGGCTGACCGCTGATACAATTGACATGATAGTTCACCGTCAGC 741766 Query 31335 CACGTAAAATTG 31346 ||||| ||||| Sbjct 741767 AACGTAGAATTG 741778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512860648678000