Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq33 102 6e-17 >seq33 Length=1400293 Score = 102 bits (112), Expect = 6e-17 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 111718 ATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAA 111777 || ||||| | ||||||||| ||||| || || |||||| || || | || | ||| Sbjct 741591 ATATGATTGAGATAAACATGAGCATCGCCAATTGTATGGATGAAATCGCCTGGTTTCAAG 741650 Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 ||||| | || |||||||||||||| | | | || || ||||| || ||||| ||| Sbjct 741651 CCAGTAACATGAGCAATCATGTATGTCAATGAAGCATAGCTTGCAATATTGAATGGTACA 741710 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTT 111883 |||| |||||||| | || | ||||| | ||||||||||||| Sbjct 741711 CCTAAACCCATATCGGCTGACCGCTGATACAATTGACATGATAGTT 741756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391828686914425