Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq22268 129 2e-25 seq22045 105 2e-18 >seq22268 Length=656 Score = 129 bits (142), Expect = 2e-25 Identities = 209/295 (71%), Gaps = 7/295 (2%) Strand=Plus/Minus Query 39030 GCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATC--GAAGTCG 39087 |||||||||||||| ||||| ||| || | | |||| || ||| ||||||| Sbjct 313 GCCGTACTTCTCGGCCACGTAATCGATGACCCGGTCGCGGC--CGTCCATGCAGAAGTCG 256 Query 39088 ATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCG 39147 | ||| | |||||||||||| || || || ||||| |||||| | ||||| | || | Sbjct 255 ACGTCGAAGTCGGGCATGGA-ACCCGTTCCGGGTTGAGGAAC-GTTCGAACAGCAGGTCA 198 Query 39148 TGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCA 39207 | | | |||| |||||||||||| | |||| || |||||||||| || | Sbjct 197 TATTCCA-GCGGTCGAGGTCGGTGATCTTCTGTACGTAGGCCACCAGCGAGCCGGCACCC 139 Query 39208 GAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCG 39267 || || || || || || ||| ||||||||| | ||| ||||| ||||||||| Sbjct 138 GACCCACGACCGGGACCTACCGGCACGCCGTTGTTCTTGGCCCACTTGATGAAGTCCATC 79 Query 39268 ACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCGTACT 39322 |||| |||||||| ||||| ||||||||| |||| || || | |||| ||| Sbjct 78 ACGATCAGGAAGTAACCGGGGAAGCCCATCTGGATGATGATATCCAGCTCGAACT 24 >seq22045 Length=722 Score = 105 bits (116), Expect = 2e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 38115 CTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTG 38174 || |||||||| |||||||||||||||||||||| || ||||| || | |||||| Sbjct 381 CTGCTTGGCCATTTCCTCGGGCTTCTTCTTGCCCATTGCCCGACGCAGCATGTCGGCGCC 322 Query 38175 ACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGAT 38234 ||| | ||||||||| |||| | ||| || || | |||||||||||| || | ||| Sbjct 321 ACCCAAGGTGTACCCCGCCATCACCTGGGCGATCTGCATCACCTGCTCCTGATAAAGGAT 262 Query 38235 GAGCCCGAAGGTCGGGTCCAG 38255 || ||| ||||||| |||| Sbjct 261 GATGCCGTAGGTCGGCGCCAG 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159668780274450