Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq10355 224 2e-54 seq898 86.0 1e-12 >seq10355 Length=764 Score = 224 bits (248), Expect = 2e-54 Identities = 322/450 (72%), Gaps = 3/450 (1%) Strand=Plus/Plus Query 3462 CATTGCGGCGGTTTCTTCAATGCTGACACCGGCATTTTTTGCCACAGGTGCGGCATAGGT 3521 |||||||| ||| | || | |||||| || || |||| ||||| |||||| ||||| Sbjct 39 CATTGCGGTGGTCTGCTCGACGCTGACGCCCGCGTTTTC-GCCACTGGTGCGATGTAGGT 97 Query 3522 CAGCGCATCGCTCATGCCGTCAAAATCGGCGGCGGTTTTGTTCATCGTCATGGAGAGAAC 3581 |||||||||||||| ||||||||| | |||||||| ||||||| ||| | || || Sbjct 98 CAGCGCATCGCTCAGGCCGTCAAAGTTTGCGGCGGTCTTGTTCAGCGTTGCGCTGATCAC 157 Query 3582 ATCCCCGATATGAGCGACCTTATCGTTTGAAAGCTGAAAGGCGGATTTCATCCCCATCAG 3641 || |||| ||| || |||| ||| | || ||||||| ||| | | |||||| Sbjct 158 GTCGCCGAGATGGGCCACCTCGCTGTTAGCCAGGCCAAAGGCGTTTTTGGTACTCATCAG 217 Query 3642 CAGGGCGGCGTTTTCTTCCATCGTGCGGCGGTTCGCCAGCGCCATATTCAGCGTGACCGG 3701 ||| | |||| |||||||||||||||| ||| ||||||| ||||| |||||| || || Sbjct 218 CAGCGAGGCGCTTTCTTCCATCGTGCGATTGTTTGCCAGCGACATATCCAGCGTCACTGG 277 Query 3702 CGTTGCCGCCTGAATGGCATCAACATCCCCACCCGCTTTCGCGATGATTATCTGTGCACC 3761 ||||||||||| ||| | || || || |||| ||| ||||| || ||||| || Sbjct 278 CGTTGCCGCCTTGATGTCGTCCACGCTACCGCCCGATTTAGCGATAATGATCTGCGCCTG 337 Query 3762 GGCCGCATCATCCGCCGAGGCTGCGGTATTGTCACCGA-GCTGGCGCGCCTGTTTGCGTA 3820 || ||||| | ||||| || || || || ||||||| ||| ||||||||| |||| | Sbjct 338 CGCGGCATCGTTGGCCGATGCGGCTGTGTTATCACCGATGCT-GCGCGCCTGCGTGCGCA 396 Query 3821 GTGCGGTCATTTCGGCGGAGTCTTTTGCCACTCCGAGCACGGCCTGCAATTCTGAGTTTT 3880 | | | || || ||| |||| | | |||||| ||||||| ||||| Sbjct 397 GGGACTGAAACTCTGCCGAGCCTTTATCAAGGCCGAGCGTTGCCTGCAGCGTGGAGTTAG 456 Query 3881 TCTGCGCAAACTCATAACCGGGCATCAGCA 3910 | |||| || || || || ||| | |||| Sbjct 457 CCAGCGCGAAGTCGTATCCCGGCTTGAGCA 486 >seq898 Length=598 Score = 86.0 bits (94), Expect = 1e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 10752 ATGAGATAGCCGAGCGGCTCCACCACACGCCGGATTGCGCCGATAGTGCCTTTATGACAG 10811 || |||||||||| ||| |||||||| || || | || ||||| || |||||||| | Sbjct 385 ATCAGATAGCCGAACGGTTCCACCACCCGGCGCAGAGCCCCGATGGTTCCTTTATGGGCG 444 Query 10812 TGGATGAAATAGGCATCGCGGATAACGGCACGTTTGGTCGCTTCCGGCCACTTTTCATCC 10871 |||| | | | | | |||||| || | || ||| | |||| |||||| || ||| Sbjct 445 TGGACGTAGAACGAAGAGCGGATCACCGAGCGCTTGACCTCTTCGGGCCACGCCTCGTCC 504 Query 10872 CACCTGTCGACCGAAAACGCCCACGCCAGCCACGGCAGCAGATTTGCCGGGCAGGTGTCC 10931 || | ||| || || | ||||| || | ||||| | ||||||||||||||| Sbjct 505 CAGCGGTCCACGGACCAGGCCCAAGCTAATTGGTAAAGCAGGTGCGCCGGGCAGGTGTCC 564 Query 10932 GGGTT 10936 ||||| Sbjct 565 GGGTT 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104408045958150