Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_028943.1 Length=29237 Score E Sequences producing significant alignments: (Bits) Value seq10355 127 4e-25 seq898 104 4e-18 >seq10355 Length=764 Score = 127 bits (140), Expect = 4e-25 Identities = 301/451 (67%), Gaps = 3/451 (1%) Strand=Plus/Minus Query 25329 TGCTGATGCCCGGTTATGAGTTTGCGCAGAAAAACTCAGAATTGCAGGCCGTGCTCGGAG 25388 |||| | ||| || || || || |||| | ||||| ||||||| |||||| Sbjct 486 TGCTCAAGCCGGGATACGACTTCGCGCTGGCTAACTCCACGCTGCAGGCAACGCTCGGCC 427 Query 25389 TGGCAAAAGACTCCGCCGAAATGACCGCACTACGCAAACAGGCGCGCCAGC-TCGGCGAC 25447 | | |||| ||| || || | | || |||| ||||||||| ||| |||| || Sbjct 426 TTGATAAAGGCTCGGCAGAGTTTCAGTCCCTGCGCACGCAGGCGCGC-AGCATCGGTGAT 368 Query 25448 AATACCGCCGCCTCGGCGGATGATGCGGCCGGTGCACAGATAATCATCGCGAAAGCGGGT 25507 || || ||||| ||||| | ||||| || || ||||| || ||||| ||| |||| Sbjct 367 AACACAGCCGCATCGGCCAACGATGCCGCGCAGGCGCAGATCATTATCGCTAAATCGGGC 308 Query 25508 GGAGATGCTGCGGCTATTCAGGCGGCAACGCCGGTCACGCTGAATATGGCACTGGCGAAT 25567 || | | | || ||||||||||||| || |||||| ||||| | ||||| || Sbjct 307 GGTAGCGTGGACGACATCAAGGCGGCAACGCCAGTGACGCTGGATATGTCGCTGGCAAAC 248 Query 25568 CAGCGGTCGATGGAAGAAAACGCGCAACTGTTGCTGGGGACTAAGGCATCCTTTCAACTG 25627 | || |||||||||||| ||| ||| || || | || || ||||| ||| Sbjct 247 AATCGCACGATGGAAGAAAGCGCCTCGCTGCTGATGAGTACCAAAAACGCCTTTGGCCTG 188 Query 25628 TCAAATGATGATGTCAGCCATGTGGGCGACGTGTTGTCGGCAACGATGAATAAGTCGGCG 25687 | || || || |||| | ||||||||| | |||||| |||| ||| | || Sbjct 187 GCTAACAGCGAGGTGGCCCATCTCGGCGACGTGATCAGCGCAACGCTGAACAAGACCGCC 128 Query 25688 GCTGATTTTCAGGGGCTCAGTGATGCACTGACTTACCTCGGGCCGGTTGCGAGGACGGCG 25747 || | ||| | || || || ||||| ||||| ||| ||| || || |||| || ||| Sbjct 127 GCAAACTTTGACGGCCTGAGCGATGCGCTGACCTACATCGCACCAGTGGCGAAAAC-GCG 69 Query 25748 GGTGTAAGTCTTGAGCAGGCAGCGGCCATGA 25778 || || || | |||||| | | || |||| Sbjct 68 GGCGTCAGCGTCGAGCAGACCACCGCAATGA 38 >seq898 Length=598 Score = 104 bits (114), Expect = 4e-18 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 18558 AACCCGGACACCTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGTCATTTTCGGTTGAC 18617 |||||||||||||||||||| | ||||| | || ||| | | || || ||| Sbjct 569 AACCCGGACACCTGCCCGGCGCACCTGCTTTACCAATTAGCTTGGGCCTGGTCCGTGGAC 510 Query 18618 CGCTGGGATGATAAGTGGCCGGAAGCGACAAAACGCGCTGTTATCCGCGATGCGTATTTC 18677 |||||||| || |||||| |||| | || ||| | || |||||| | ||| | | Sbjct 509 CGCTGGGACGAGGCGTGGCCCGAAGAGGTCAAGCGCTCGGTGATCCGCTCTTCGTTCTAC 450 Query 18678 ATTCACTGCCATAAGGGCACTATTGGTGCGATTCGCCGTGTGGTGGAGCCGCTCGGCTAT 18737 | ||| |||||| || || || || || | ||||| |||||||| ||| |||||||| Sbjct 449 GTCCACGCCCATAAAGGAACCATCGGGGCTCTGCGCCGGGTGGTGGAACCGTTCGGCTAT 390 Query 18738 CTGATTGAGGTGAGGGAGTGGT 18759 ||||| ||||| ||||||| Sbjct 389 CTGATCGAGGTAGTCGAGTGGT 368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93409643470050