Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq22268 127 7e-25 seq22045 105 2e-18 >seq22268 Length=656 Score = 127 bits (140), Expect = 7e-25 Identities = 210/297 (71%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 39457 GTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATC--G 39514 || || |||||||||||||| ||||| ||| || | | |||| || ||| | Sbjct 319 GTTGCGGCCGTACTTCTCGGCCACGTAATCGATGACCCGGTCGCGGC--CGTCCATGCAG 262 Query 39515 AAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACCGCTCGAAGATG 39574 ||||||| ||| | |||||||||||| || || || ||||| |||||| | ||||| | Sbjct 261 AAGTCGACGTCGAAGTCGGGCATGGA-ACCCGTTCCGGGTTGAGGAAC-GTTCGAACAGC 204 Query 39575 AGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCA 39634 || | | | | |||| |||||||||||| | |||| || |||||||||| Sbjct 203 AGGTCATATTCCA-GCGGTCGAGGTCGGTGATCTTCTGTACGTAGGCCACCAGCGAGCCG 145 Query 39635 GCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCCCAGCCGATGAAG 39694 || | || ||||| || || || ||| ||| ||||| | ||| ||||| ||||||| Sbjct 144 GCACCCGACCCACGACCGGGACCTACCGGCACGCCGTTGTTCTTGGCCCACTTGATGAAG 85 Query 39695 TCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCG 39751 || |||| |||||||| ||||| ||||||||| |||| || || | |||| Sbjct 84 TCCATCACGATCAGGAAGTAACCGGGGAAGCCCATCTGGATGATGATATCCAGCTCG 28 >seq22045 Length=722 Score = 105 bits (116), Expect = 2e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 38548 CTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTG 38607 || |||||||| |||||||||||||||||||||| || ||||| || | |||||| Sbjct 381 CTGCTTGGCCATTTCCTCGGGCTTCTTCTTGCCCATTGCCCGACGCAGCATGTCGGCGCC 322 Query 38608 ACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGAT 38667 ||| | ||||||||| |||| | ||| || || | |||||||||||| || | ||| Sbjct 321 ACCCAAGGTGTACCCCGCCATCACCTGGGCGATCTGCATCACCTGCTCCTGATAAAGGAT 262 Query 38668 GAGCCCGAAGGTCGGGTCCAG 38688 || ||| ||||||| |||| Sbjct 261 GATGCCGTAGGTCGGCGCCAG 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160193427746250