Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_029066.1 Length=48666 Score E Sequences producing significant alignments: (Bits) Value seq21826 91.5 5e-14 >seq21826 Length=596 Score = 91.5 bits (100), Expect = 5e-14 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 39 CTGTACCAATTTCGTACCGATTAGGC-GTTTTC-AGCTTGTCCAGTTCGGCCCAATCGGC 96 |||||||||||| ||||| | | || |||||| ||||| | |||||| |||| |||| Sbjct 121 CTGTACCAATTTTGTACCACTCAAGCTGTTTTCGAGCTTCCCGAGTTCGCCCCAGTCGGT 180 Query 97 GCTTGAGTTGATCCATTTCGCGTAGTGCTTGAGCAGCGTCTGGATGCTGTTGCCGAGCTG 156 ||| |||||||||||| || ||| | ||||| | |||| | ||||| || ||||| Sbjct 181 GCTGGAGTTGATCCATCGGGCATAGGTCGAGAGCAACATCTGAACGCTGTGACCCAGCTG 240 Query 157 CTGCGCGATGAAGGCCGGAGCCATCCCGGCAGACAGGCAGACGGTCGCATAGGTGTGCCG 216 || || || || || ||| || || ||||| | ||| || || ||||| || Sbjct 241 AGTGGCAATAAACGCAGGGTTCATACCCGCCATGAGGCACATGGTAGCGTATGTGTGTCG 300 Query 217 GGTATCGTACTGCCGGCGCGGACGAAT 243 | | ||| ||||| || | ||||| Sbjct 301 GCAGTTGTATTGCCGACGGGCGCGAAT 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155564373528600