Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq33 91.5 1e-13 >seq33 Length=1400293 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 126075 TCCATATGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCT-C 126133 || ||||||||| ||||| ||| ||||| |||| |||||| ||||| || || | | Sbjct 741588 TCAATATGATTGAGATAAACATGAGCATCGCCAATTGTATGGATGAAATCGCCTGGTTTC 741647 Query 126134 AAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGG 126193 ||| ||| | | |||| | | ||||| | ||||||| |||||||||||||| || Sbjct 741648 AAG-CCAGTAACATGAGCAATCATGTATGTCAATGAAGCATAGCTTGCAATATTGAATGG 741706 Query 126194 AACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTG 126253 ||||||||| ||||| || | ||||| |||||||| || || ||| || Sbjct 741707 TACACCTAAACCCATATCGGCTGACCGCTGATACAATTGACATGATAGTTCACCGTCAGC 741766 Query 126254 TACGTAAAATTG 126265 ||||| ||||| Sbjct 741767 AACGTAGAATTG 741778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408476519566325