Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq33 96.9 3e-15 >seq33 Length=1400293 Score = 96.9 bits (106), Expect = 3e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 125416 TGTATCAACGATCAGCAGACGTATTTTTAGGAGTACCATTCAATATCGCAAGCTACGCAC 125475 ||||||| || ||||| || | |||||| |||||||||||||| |||||||| || Sbjct 741741 TGTATCAGCGGTCAGCCGATATGGGTTTAGGTGTACCATTCAATATTGCAAGCTATGCTT 741682 Query 125476 TATTGACTCACCTTATCGCAAAGATGACAGGGTTAAAACCCGGAAAATTCATTCATACCT 125535 |||||| || | || || | | || || || ||||| || | ||||| ||||| Sbjct 741681 CATTGACATACATGATTGCTCATGTTACTGGCTTGAAACCAGGCGATTTCATCCATACAA 741622 Query 125536 TTGGTGACGCTCATATCTATAACAACCACATTGAAGCAGTAAA 125578 |||| || |||||| | ||| ||| || |||||| || |||| Sbjct 741621 TTGGCGATGCTCATGTTTATCTCAATCATATTGAACCATTAAA 741579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484258201917000