Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq33 145 6e-30 >seq33 Length=1400293 Score = 145 bits (160), Expect = 6e-30 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 118470 TGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGG 118529 ||| ||||| ||||| | ||| ||||||||||| ||||||||||| ||||| || || || Sbjct 741584 TGGTTCAATATGATTGAGATAAACATGAGCATCGCCAATTGTATGGATGAAATCGCCTGG 741643 Query 118530 TGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAA 118589 | | | || || | |||||||||||||||||||| || ||||| || | ||| || Sbjct 741644 TTTCAAGCCAGTAACATGAGCAATCATGTATGTCAATGAAGCATAGCTTGCAATATTGAA 741703 Query 118590 AGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTT 118649 || ||||| | |||||| || ||||| | ||| |||||||| || || || || |||| Sbjct 741704 TGGTACACCTAAACCCATATCGGCTGACCGCTGATACAATTGACATGATAGTTCACCGTC 741763 Query 118650 TGCAACATAAAACTG 118664 ||||| || || || Sbjct 741764 AGCAACGTAGAATTG 741778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414353166103900