Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq17930 84.2 2e-11 >seq17930 Length=2109152 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || |||||||||| || || ||||| ||||| ||||||| | ||| || | Sbjct 1835522 CGCAATACCAAATGTAATGTTGATTCCTTTTGGATATTGTAATCGGACAATGTACGGCCA 1835463 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || | ||||| || ||||| || | ||| || ||||| | || | || |||||| Sbjct 1835462 TCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGGTCTGGTGGAATGCCTTCTTTG 1835403 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || |||||| |||| | | | || ||| | ||| || || | |||||| Sbjct 1835402 TCTTGGATTTTAGCCTTGACATTTTCGATTGTGTCGGATGGCTCGACTTCAAGTGTGATA 1835343 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTT 39288 | || || || || |||||||| || |||||||||||| Sbjct 1835342 GTCTTGCCGGTTAGAGTTTTAACGAAAATTTGCATCTTT 1835304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429417471245675