Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq17930 95.1 1e-14 >seq17930 Length=2109152 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || |||| || || |||||||| ||||| ||||||||||||| || || | |||| Sbjct 1835519 AATACCAAATGTAATGTTGATTCCTTTTGGATATTGTAATCGGACAATGTACGGCCATCT 1835460 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 ||||||||||| || ||| | || | | |||||||||| || | |||||||||||| Sbjct 1835459 TCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGGTCTGGTGGAATGCCTTCTTTGTCT 1835400 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTT 101206 ||||| || |||| | | || || | | | ||| | || ||||| Sbjct 1835399 TGGATTTTAGCCTTGACATTTTCGATTGTGTCGGATGGCTCGACTTCAAGTGTGATAGTC 1835340 Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||||| || | ||||||| ||||||||||| Sbjct 1835339 TTGCCGGTTAGAGTTTTAACGAAAATTTGCAT 1835308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409538602664025