Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_030918.1 Length=36629 Score E Sequences producing significant alignments: (Bits) Value seq18687 228 2e-55 >seq18687 Length=1155 Score = 228 bits (252), Expect = 2e-55 Identities = 356/505 (70%), Gaps = 13/505 (3%) Strand=Plus/Minus Query 20140 AGTGGATCGGTCAGCGTGTCATCAAGGACATGGCGGCCCAGGGCTACCAGATCACCAACA 20199 |||||||||| | ||||| ||||| |||||||||| || |||||| |||||| |||| Sbjct 1155 AGTGGATCGGCGACCGTGTGCTCAAGAACATGGCGGCGCACGGCTACTCGATCACTAACA 1096 Query 20200 AGCTCTTCGAATCGACCGTGGGCGTAAAACGTACCGACATCGAGGACGACAACCTCGGCG 20259 | ||||| ||| | || ||||| || | |||||| |||||| | |||||| Sbjct 1095 AAAAATTCGAGTCGTCGGTAGGCGTTCCTCGCGACTCCATCGAAGACGACGAAATCGGCG 1036 Query 20260 TCTACGGACCGCTCATGCAGGAAATGGGGCGTGCTGCCGGCGCGCATCCCGACGAACTGG 20319 ||||| ||||| | || ||||| || || || |||| || ||||||||||||| Sbjct 1035 TCTACAAGCCGCTGTTCGCCGAGATGGGTCGAGCCTCCAGCGCCCACCCCGACGAACTGG 976 Query 20320 TCTTCGCCCTGCTCAAGGCCGGCAACGCCAATCTCTGCTACGACGGTCAAAACTTCTTCG 20379 | || | |||||| || ||||| | | | ||||||||||| ||||||||||||| Sbjct 975 TGTTTGGCCTGCTGAAAGCCGGACTGACTACGCAGTGCTACGACGGCCAAAACTTCTTCG 916 Query 20380 ACACCGATCACCCGGTCTATCCGAACGTGGATGGCACCGGCACGGCGACCACCGTTAGCA 20439 || |||||||||| ||||| || | || |||||||| || || | || |||| Sbjct 915 ACGCCGATCACCCTGTCTACCCAGAGACCGACGGCACCGGTACTGCTGTATCGGTCAGCA 856 Query 20440 ACCTGTTC-GCGCCGGCCGCTGATCCGGGGGCGGCCTGGTATCTGCTCGACACCAGCCGC 20498 || | | | |||| | || ||||||||||||||||||| ||| ||| Sbjct 855 AC---TACAAAGACGGC-------ACCGGCCCGGCCTGGTATCTGCTCGATGTCAGTCGC 806 Query 20499 AGCCTCAAGCCGTTGATCTACCAGGAGCGCATGAAACCGT-CGTTCACTTCGATGACCAA 20557 |||||||| | |||| ||| || | | ||| | | ||| | ||||||| Sbjct 805 GCAATCAAGCCGATCATCTTCCA-GACCCGTCGCAACTATGCCCTCAAAGCAATGACCAG 747 Query 20558 GGAAGACGACGAGCAGGTCTTCATGGCCGACGAGTACCGCTACGGCGTGCGCTCCCGCTG 20617 ||||| |||||||| |||||| ||||||||||||||| ||||| | ||||| Sbjct 746 CATGGACGATGAGCAGGTGTTCATGCGCGACGAGTACCGCTATGGCGTCGACGCCCGCGT 687 Query 20618 CAACGTCGGCTTCGGCTTCTGGCAA 20642 ||| || || ||||||||||||||| Sbjct 686 CAATGTGGGTTTCGGCTTCTGGCAA 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117057168540450