Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq22268 149 2e-31 seq22045 96.9 1e-15 >seq22268 Length=656 Score = 149 bits (164), Expect = 2e-31 Identities = 213/294 (72%), Gaps = 7/294 (2%) Strand=Plus/Minus Query 40116 CCGTACTTCTCGGTGACGTACCTGATCACGTCGCCCCGTCGCCGGTCATC--GAAGTCGA 40173 ||||||||||||| ||||| ||| || | | || |||| ||| |||||||| Sbjct 312 CCGTACTTCTCGGCCACGTAATCGATGACCCGGTCGCG--GCCGTCCATGCAGAAGTCGA 255 Query 40174 TGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGT 40233 ||| | |||||||||||| || || || ||||| ||||| || ||||| | || | | Sbjct 254 CGTCGAAGTCGGGCATGGA-ACCCGTTCCGGGTTGAGGAA-CGTTCGAACAGCAGGTCAT 197 Query 40234 GCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAGGCGACCAGCGAACCGGCAGCCG 40293 | | |||| ||||| ||||| | |||||| |||||||| |||||| ||| Sbjct 196 ATTCCA-GCGGTCGAGGTCGGTGATCTTCTGTACGTAGGCCACCAGCGAGCCGGCACCCG 138 Query 40294 AGCCACGTCCGGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGA 40353 | ||||| ||||| || ||| ||||||||| | ||||||||| ||||||||| | Sbjct 137 ACCCACGACCGGGACCTACCGGCACGCCGTTGTTCTTGGCCCACTTGATGAAGTCCATCA 78 Query 40354 CGACCAGGAAGTAGGACGGGAACCCCAGCTGGATGATCATGTCGATCTCGTACT 40407 ||| ||||||||| ||||| |||| ||||||||| || || | |||| ||| Sbjct 77 CGATCAGGAAGTAACCGGGGAAGCCCATCTGGATGATGATATCCAGCTCGAACT 24 >seq22045 Length=722 Score = 96.9 bits (106), Expect = 1e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 39200 CTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGGCCTG 39259 || |||||||| |||||||||||||||||||||| || || || || | |||||| Sbjct 381 CTGCTTGGCCATTTCCTCGGGCTTCTTCTTGCCCATTGCCCGACGCAGCATGTCGGCGCC 322 Query 39260 ACCCAGGCTGTACCCAGCGAGGATCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGATGAC 39319 ||||| | ||||||| || | | ||| || || | |||||||||||| || | || Sbjct 321 ACCCAAGGTGTACCCCGCCATCACCTGGGCGATCTGCATCACCTGCTCCTGATAAAGGAT 262 Query 39320 CAGCCCGTAGGTCGGCCCCAG 39340 | |||||||||||| |||| Sbjct 261 GATGCCGTAGGTCGGCGCCAG 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160094256577800