Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq21826 127 6e-25 seq1108 102 2e-17 >seq21826 Length=596 Score = 127 bits (140), Expect = 6e-25 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23817 TGTACCACTTTTGTACCAATCGCGAACCGATCAAGCTTATCGAGCTCGGCTCTGTCGGCA 23876 ||||||| |||||||||| || | || ||||| |||| ||| | | ||||| Sbjct 122 TGTACCAATTTTGTACCACTCAAGCTGTTTTCGAGCTTCCCGAGTTCGCCCCAGTCGGTG 181 Query 23877 TCAGAGTTCATCCACTTCGCATAGGTGGACAGTAGCATTTGTACGCTATGACCGAGCTGA 23936 ||||| ||||| |||||||| || || | ||| || ||||| ||||| |||||| Sbjct 182 CTGGAGTTGATCCATCGGGCATAGGTCGAGAGCAACATCTGAACGCTGTGACCCAGCTGA 241 Query 23937 TTCGCAATGAACGCCGGATTCATCCCCGCCATTAGGCACATGGTCGCGTAGGTGTGCCGA 23996 | ||||| ||||| || ||||| |||||||| ||||||||||| ||||| ||||| || Sbjct 242 GTGGCAATAAACGCAGGGTTCATACCCGCCATGAGGCACATGGTAGCGTATGTGTGTCGG 301 Query 23997 GTGTCGTACTGCCGGCGG 24014 || ||| ||||| ||| Sbjct 302 CAGTTGTATTGCCGACGG 319 >seq1108 Length=709 Score = 102 bits (112), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 23907 AGTAGCATTTGTACGCTATGACCGAGCTGATTCGCAATGAACGCCGGATTCATCCCCGCC 23966 || |||| || ||||| || ||||| || || ||||| ||||| ||||| || ||| Sbjct 267 AGCAGCACCTGCACGCTGTGCCCGAGTTGCGCGGCGATGAATGCCGGGTTCATGCCGGCC 326 Query 23967 ATTAGGCACATGGTCGCGTAGGTGTGCCGAGTGTCGTACTGCCGGCGGCGCCTGAT 24022 | ||||||||||||||||| ||||| || ||||||||| ||| |||| ||||||| Sbjct 327 ACCAGGCACATGGTCGCGTACGTGTGGCGCGTGTCGTACAGCCTGCGGTGCCTGAT 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138324585568050