Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq33 82.4 3e-11 >seq33 Length=1400293 Score = 82.4 bits (90), Expect = 3e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 52138 TCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACA 52197 |||||||||| || ||||| ||| | || || || || |||||||||||||| ||||| | Sbjct 741780 TCCAATTCTACGTTGCTGACGGTGAACTATCATGTCAATTGTATCAGCGGTCAGCCGATA 741721 Query 52198 TGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTC 52257 || || || || || || || ||||| |||||| | | |||| | ||||||||| Sbjct 741720 TGGGTTTAGGTGTACCATTCAATATTGCAAGCTATGCTTCATTGACATACATGATTGCTC 741661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190040750379750