Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq305 111 2e-19 >seq305 Length=1407860 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 16795 TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACG 16854 ||| || || |||||||| |||||||| ||||| | || || ||||| ||||| | Sbjct 686054 TCTGTCTGCGACAAATTCGATATATTGACACATAAGTTTACAATTCATGCCTATCATTTC 686113 Query 16855 TACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACT 16914 || || | || || || |||||| ||| || || | || || || |||||||| Sbjct 686114 AACAGGTAATGCATCTGTTAAAAATTCTTGTTCAATTTCCACAGCATCTTTAATAATTGA 686173 Query 16915 AGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATC 16974 | |||||| || ||||| | ||| ||| |||||||||||| | |||||| ||||| Sbjct 686174 CGTAACTCGCTCAGAAGACGGCTTTTGTATAATATGTTTAAACATTAAACATGCAAAATC 686233 Query 16975 GCAATGTAATCCCT 16988 ||||||||||||| Sbjct 686234 ACAATGTAATCCCT 686247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517505063240880