Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq305 102 8e-17 >seq305 Length=1407860 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || ||||||||||| | ||| |||||||||||| || | || || || |||| || Sbjct 686658 ATGTACGTATCAATTAATAATGAGTACATTTCTGAATGCACATTTTCCATAGCTACTTGG 686717 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || |||||||| || || ||||| | ||| ||||||||| ||||||||| | || Sbjct 686718 AAGCCATAGAAACAACGTGCCTCTGTTATCTGTACTTCCTGACTAAATCGTTCAACAAGA 686777 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || ||||| || || || ||| || |||||||| || |||| || ||||||| Sbjct 686778 TTTTCATTGACAATTCCATCAGAGGCTGCAAAAAATGCTAATACATGAGATATGAAATGC 686837 Query 16652 TTTTCGTCAGATGTAAGAATATGCCAATC 16680 || || ||| || | | || |||||| Sbjct 686838 TTCTCACTAGAAGTCAAACGATCCCAATC 686866 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCG 16092 ||| ||||| |||||||| |||||||||||||| | | ||||| || ||||| | | Sbjct 686054 TCTGTCTGCGACAAATTCGATATATTGACACATAAGTTTACAATTCATGCCTATCATTTC 686113 Query 16093 TACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATC 16152 || || | || | ||||||||||| |||||| || | || || |||||||| || Sbjct 686114 AACAGGTAATGCATCTGTTAAAAATTCTTGTTCAATTTCCACAGCATCTTTAATAATTGA 686173 Query 16153 GGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTC 16212 || |||| |||||| | || | | ||||||||||||| ||| || || || Sbjct 686174 CGTAACTCGCTCAGAAGACGGCTTTTGTATAATATGTTTAAACATTAAACATGCAAAATC 686233 Query 16213 GCAATGTAGTCC 16224 ||||||| ||| Sbjct 686234 ACAATGTAATCC 686245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511374343467120