Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq305 102 8e-17
>seq305
Length=1407860
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| ||||||||||| | ||| |||||||||||| || | || || || |||| ||
Sbjct 686658 ATGTACGTATCAATTAATAATGAGTACATTTCTGAATGCACATTTTCCATAGCTACTTGG 686717
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| |||||||| || || ||||| | ||| ||||||||| ||||||||| | ||
Sbjct 686718 AAGCCATAGAAACAACGTGCCTCTGTTATCTGTACTTCCTGACTAAATCGTTCAACAAGA 686777
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651
|| ||||| || || || ||| || |||||||| || |||| || |||||||
Sbjct 686778 TTTTCATTGACAATTCCATCAGAGGCTGCAAAAAATGCTAATACATGAGATATGAAATGC 686837
Query 16652 TTTTCGTCAGATGTAAGAATATGCCAATC 16680
|| || ||| || | | || ||||||
Sbjct 686838 TTCTCACTAGAAGTCAAACGATCCCAATC 686866
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCG 16092
||| ||||| |||||||| |||||||||||||| | | ||||| || ||||| | |
Sbjct 686054 TCTGTCTGCGACAAATTCGATATATTGACACATAAGTTTACAATTCATGCCTATCATTTC 686113
Query 16093 TACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATC 16152
|| || | || | ||||||||||| |||||| || | || || |||||||| ||
Sbjct 686114 AACAGGTAATGCATCTGTTAAAAATTCTTGTTCAATTTCCACAGCATCTTTAATAATTGA 686173
Query 16153 GGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTC 16212
|| |||| |||||| | || | | ||||||||||||| ||| || || ||
Sbjct 686174 CGTAACTCGCTCAGAAGACGGCTTTTGTATAATATGTTTAAACATTAAACATGCAAAATC 686233
Query 16213 GCAATGTAGTCC 16224
||||||| |||
Sbjct 686234 ACAATGTAATCC 686245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511374343467120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |