Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq202 149 5e-31
>seq202
Length=497029
Score = 149 bits (164), Expect = 5e-31
Identities = 173/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 102035 TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094
|| || |||||||| |||| ||||| ||||||||||| |||||||| |||||||||||
Sbjct 1079 TTGTACTCTGCTCCATAATGTCTCCATTGAAATCCATATACAGGTCCCAGATCTCCTTCT 1020
Query 102095 TCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATG 102154
||||||||| ||| ||| ||||| ||| | || | ||| |||||||||||
Sbjct 1019 TCTCTGTCAGTAAATCCACAAGAATCTAGGTATGTACGCGAACTATTTGCATCCCAAATA 960
Query 102155 TGCAC-GCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAG 102213
|| || | || |||||| |||||| | || |||||| | |||||||| ||||
Sbjct 959 TGAACATTCTTCT-CTGATAACTCTTTTGCATTTGTGGATCCTTTTATAAACCATAACAA 901
Query 102214 TTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264
|||||| || || || |||||||| ||| || |||||||| | ||||||
Sbjct 900 TTCTTCTACTACTCCCCTCCAAAACACTTGTTTTGTAGTTAATAATGGAAA 850
Score = 104 bits (114), Expect = 2e-17
Identities = 164/230 (71%), Gaps = 9/230 (4%)
Strand=Plus/Minus
Query 101746 TAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGG 101805
|||||| || || ||||| | |||| ||||||| || ||||| || |||||||||||
Sbjct 1458 TAGATTTGTAACGTGAGCTAACATGTAAGTTAACAGTGAATACGATGCTATGTTAAATGG 1399
Query 101806 CACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACA 101865
||||| | ||||| || || ||||||||||| || || || | | ||||| ||
Sbjct 1398 TACTCCAAGACCCATGTCGGCGCTTCTTTGATACAACTGGCACGATAATTCTCCATTACT 1339
Query 101866 GACATAAAATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924
|||||||| || || || | |||||| || || || ||||||| || || || ||
Sbjct 1338 TACATAAAACTGTACAAAACA-ATGACATGGAGGTAAAGCCATTTTTGGTATATC---AA 1283
Query 101925 C---ATTCCAAGCACACATTAACATCCTTCTATCTGTAGG-GTTTGTTTT 101970
| ||||| || |||||| || || ||||| |||| | ||||||
Sbjct 1282 CTGGGTTCCATGCTGACATTATTATTCTCCTATCATTAGGAGAATGTTTT 1233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361223612374766
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |