Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq467 122 7e-23
seq459 91.5 1e-13
seq307 91.5 1e-13
>seq467
Length=2555529
Score = 122 bits (134), Expect = 7e-23
Identities = 156/213 (73%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||| || ||| | || |||||||| || || ||||| || ||| ||| || |
Sbjct 1366343 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTTGAAGTTGAAGCCTC 1366284
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
||| || | | || | || |||||| |||||||| ||| | || ||| ||
Sbjct 1366283 AGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAGGGTATTCCTCCAGACCA 1366224
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211
||||||||| ||||| || |||||||||||||||||| | | | ||| | || |||
Sbjct 1366223 ACAAAGACTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACATTAT--CTGACTAC 1366166
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTG 25244
||||||||||||||||||||||||||| | |||
Sbjct 1366165 AATATTCAAAAGGAATCTACTCTTCACCTTGTG 1366133
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||| || ||| | || |||||||| || || ||||| || |||| |||| | |
Sbjct 1366115 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTCGAAGTGGAAGCATC 1366056
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
||| || | | || | || |||||| || ||||||||| | || ||||||
Sbjct 1366055 AGATACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCA 1365996
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
||||||| | |||||||| || |||||||| |||||| || | ||||||||||
Sbjct 1365995 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACAA 1365936
Query 25214 TATTCAAAAGGAATCTACTCTTCA 25237
||||||||| ||||| || |||||
Sbjct 1365935 TATTCAAAAAGAATCAACCCTTCA 1365912
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||| |||||| | ||||| | || || ||||| || ||| ||| || | |
Sbjct 1364842 AATGCAGATATTCGTGAAAACCCTTACTGGAAAAACTATAACCTTGGAAGTTGAGGCATC 1364783
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | ||| |||||| || ||||||||| | || ||||||
Sbjct 1364782 TGACACCATTGAGAATGTAAAGGCTAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCA 1364723
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
||||||| | |||||||| || |||||||| |||||| || | ||||||||||
Sbjct 1364722 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACAA 1364663
Query 25214 TATTCAAAAGGAATCTACTCTTCA 25237
||||||||| ||||| || |||||
Sbjct 1364662 TATTCAAAAAGAATCAACCCTTCA 1364639
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| | || ||||||||||| |||||||| ||| ||| || | ||
Sbjct 1366570 ATGCAGATTTTCGTAAAGACATTGACGGGAAAAACCATAACCCTCGAGGTTGAGGCATCA 1366511
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | || |||||| |||||||| || | || ||||||
Sbjct 1366510 GACACCATCGAGAATGTTAAAGCAAAAATCCAGGATAAAGAGGGCATCCCACCAGATCAG 1366451
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CCAAAACTATGGCCGATTACA 25212
|| ||| | ||||| || || |||||||| |||||| | | ||| | | || ||||
Sbjct 1366450 CAGAGATTGATCTTCGCTGGTAAACAATTAGAAGATGGACGCACACTTT--CTGACTACA 1366393
Query 25213 ATATTCAAAAGGAATCTACTCTTCAC 25238
|||| |||||||||||||| ||||||
Sbjct 1366392 ATATACAAAAGGAATCTACACTTCAC 1366367
Score = 89.7 bits (98), Expect = 4e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 25131 AAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT 25190
||||||||| | || ||||||||||||| | |||||||| || |||||||| ||||||
Sbjct 1365092 AAAGAAGGTATTCCTCCAGATCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGAT 1365033
Query 25191 TCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237
|| | ||||||||||||||||||| ||||| || |||||
Sbjct 1365032 GGACGCACGTTATCCGATTACAATATTCAAAAAGAATCAACCCTTCA 1364986
>seq459
Length=558815
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208
|| ||||||||| | || ||||| || || |||||||||||| | |||| || | |||
Sbjct 439489 GACCAACAAAGATTAATTTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTGTCAGAT 439430
Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| |||||||||||||||||||| | || | || ||||| ||| |||| ||
Sbjct 439429 TATAATATTCAAAAGGAATCTACATTGCATTTAGTCTTACGTTTAAGAGGTGG 439377
>seq307
Length=2169461
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
||||||||| || |||| ||| | || || |||||||| ||| ||| ||| | |
Sbjct 1514524 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCTTC 1514583
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
||| ||| | | || |||| || || ||||||||||| | || |||||
Sbjct 1514584 AGATACGATAGAGAATGTCAAAGCTAAGATCCAAGATAAAGAAGGAATTCCTCCTGATCA 1514643
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
||| || | |||||||| || || || |||||||| | || | | ||||| ||
Sbjct 1514644 GCAACGATTAATCTTTGCTGGAAAGCAGCTGGAAGATGGAAGGACACTTTCAGATTATAA 1514703
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||||||| ||||| || |||||| | ||| | || | ||||||||
Sbjct 1514704 TATTCAAAAAGAATCAACACTTCACCTTGTGCTGAGACTTCGAGGAGG 1514751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410765428732124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |