Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq307 111 2e-19
seq467 102 8e-17
seq321 82.4 8e-11
>seq307
Length=2169461
Score = 111 bits (122), Expect = 2e-19
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || ||||| || |||||||||||| | || |||||||| |
Sbjct 1510090 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510149
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| | |||| || || | ||||||||||| ||||| | |||||
Sbjct 1510150 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1510209
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 40866
||||||| | |||| || || || ||||| || || | || ||| ||| || ||
Sbjct 1510210 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCA--GATTAT 1510267
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||| || || || |||| || ||||| ||
Sbjct 1510268 AACATTCAAAAAGAATCCACACTTCATCTGGT 1510299
Score = 111 bits (122), Expect = 2e-19
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || ||||| || |||||||||||| | || |||||||| |
Sbjct 1510318 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510377
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| | |||| || || | ||||||||||| ||||| | |||||
Sbjct 1510378 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1510437
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 40866
||||||| | |||| || || || ||||| || || | || ||| ||| || ||
Sbjct 1510438 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCA--GATTAT 1510495
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||| || || || |||| || ||||| ||
Sbjct 1510496 AACATTCAAAAAGAATCCACACTTCATCTGGT 1510527
Score = 111 bits (122), Expect = 2e-19
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || ||||| || |||||||||||| | || |||||||| |
Sbjct 1514752 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1514811
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| | |||| || || | ||||||||||| ||||| | |||||
Sbjct 1514812 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1514871
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 40866
||||||| | |||| || || || ||||| || || | || ||| ||| || ||
Sbjct 1514872 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCA--GATTAT 1514929
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||| || || || |||| || ||||| ||
Sbjct 1514930 AACATTCAAAAAGAATCCACACTTCATCTGGT 1514961
Score = 109 bits (120), Expect = 6e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || ||||| || |||||||||||| | || |||||||| |
Sbjct 1515671 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515730
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | || || | ||||||||||| || || | || ||
Sbjct 1515731 TGACACAATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAGGGAATACCTCCAGATCA 1515790
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||||| | |||| || || || ||||| || || | | | || ||| || |||||
Sbjct 1515791 GCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTCTCTGATTACAA 1515850
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| || || || |||| || ||||| ||
Sbjct 1515851 CATTCAAAAAGAATCCACACTTCATCTGGT 1515880
Score = 107 bits (118), Expect = 2e-18
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || ||||| || ||||||||||| | || |||||||| |
Sbjct 1509862 AATGCAAATCTTCGTGAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1509921
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| | |||| || || | ||||||||||| ||||| | |||||
Sbjct 1509922 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1509981
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 40866
||||||| | |||| || || || ||||| || || | || ||| ||| || ||
Sbjct 1509982 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCA--GATTAT 1510039
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||| || || || |||| || ||||| ||
Sbjct 1510040 AACATTCAAAAAGAATCCACACTTCATCTGGT 1510071
Score = 107 bits (118), Expect = 2e-18
Identities = 127/172 (74%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || ||||| || |||||||||||| | || |||||||| |
Sbjct 1514980 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515039
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| | |||| ||| || | ||||||||||| ||||| | |||||
Sbjct 1515040 TGACACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1515099
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 40860
||||||| | |||| || || || ||||| || || | | || ||||||
Sbjct 1515100 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTCAAC 1515151
Score = 107 bits (118), Expect = 2e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || ||||| || ||||||||||| | || |||||||| |
Sbjct 1515215 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1515274
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| | |||| ||| || | ||||||||||| || ||| | | ||
Sbjct 1515275 TGACACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATTCCCCCTCATCA 1515334
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||||| | |||| || || ||||| || || || | | || ||| || |||||
Sbjct 1515335 GCAACGATTAATCTTTGCTGGGAAACAACTTGAAGATGGAAGGACACTCTCTGATTACAA 1515394
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
||| || || || |||| || ||||| || |||
Sbjct 1515395 CATTCAAAAAGAATCCACACTTCATCTGGTTTTG 1515428
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || ||||| || ||||| |||||| | || || |||||| |
Sbjct 1515443 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1515502
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | || || | |||||||| || || || | |||||
Sbjct 1515503 AGACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACCA 1515562
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||||| | |||| || || || ||||| || || | | | || || || || ||
Sbjct 1515563 GCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTGTCAGATTATAA 1515622
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| || || || |||| || ||||| ||
Sbjct 1515623 CATTCAAAAAGAATCCACCCTTCATCTGGT 1515652
Score = 93.3 bits (102), Expect = 4e-14
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || ||||| || ||||| |||||| | || || |||||| |
Sbjct 1510546 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1510605
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | || || | |||||||| || || || | |||||
Sbjct 1510606 AGACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACCA 1510665
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 40866
||||||| | |||| || || || ||||| || || | || ||| ||| || ||
Sbjct 1510666 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCA--GATTAT 1510723
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||| || || || |||| || ||||| ||
Sbjct 1510724 AACATTCAAAAAGAATCCACACTTCATCTGGT 1510755
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || || || || || || || || || ||||||||| | || ||||||||
Sbjct 1509631 AAATATGCAGATCTTTGTCAAGACACTTACAGGGAAGACCATCACCCTGGAAGTCGAAGC 1509690
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| || | | | | |||||| || || | ||||||||||| ||||| | ||
Sbjct 1509691 TTCAGATACGATAGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGA 1509750
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGAC 40863
|||||||||| | |||| || || || ||||| || || | || ||| ||| ||
Sbjct 1509751 CCAGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCA--GAT 1509808
Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| ||||| || || || |||| || ||||| ||
Sbjct 1509809 TATAACATTCAAAAAGAATCCACACTTCATCTGGT 1509843
>seq467
Length=2555529
Score = 102 bits (112), Expect = 8e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| || || || || ||||| || | || || || || |
Sbjct 1364613 ATGCAGATCTTTGTGAAAACTCTTACTGGAAAGACCATTACTTTGGAAGTTGAGGCATCA 1364554
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| ||||| | || ||||| ||||||||| | |||||
Sbjct 1364553 GACACTATTGAGAACGTT-AAGGCTAAAATCCAGGATAAAGAAGGCATCCCCCCAGACCA 1364495
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| || | |||| ||| || || ||| | || || | |||||| || ||||||||
Sbjct 1364494 GCAAAGATTGATCTTCGCTGGTAAGCAGTTAGAAGATGGGCGCACACTATCTGACTACAA 1364435
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| ||||| ||| | || || ||||| ||
Sbjct 1364434 CATTCAGAAAGAGTCAACACTCCATCTTGT 1364405
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || |||||||| || | ||||| |||||||| ||| |||| || || || |
Sbjct 1366570 ATGCAGATTTTCGTAAAGACATTGACGGGAAAAACCATAACCCTCGAGGTTGAGGCATCA 1366511
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | || | |||||| | || |||||||||||||| | || |||
Sbjct 1366510 GACACCATCGAGAATGTTAAAGCAAAAATCCAGGATAAAGAGGGCATCCCACCAGATCAG 1366451
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| || ||||| | || || | ||||| || ||||||||
Sbjct 1366450 CAGAGATTGATCTTCGCTGGTAAACAATTAGAAGATGGACGCACACTTTCTGACTACAAT 1366391
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| || ||||| | || || || || ||
Sbjct 1366390 ATACAAAAGGAATCTACACTTCACCTTGT 1366362
>seq321
Length=1097274
Score = 82.4 bits (90), Expect = 8e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| |||||||| ||||| | ||||||||||| ||||| |||| || ||||| |
Sbjct 785460 ATGCAGATATTCGTGAAAACTTTGACGGGCAAAACTATCACGCTCGAGGTAGAAGCGTCT 785401
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | ||| | || | ||||||| || ||||| || || || | || ||
Sbjct 785400 GATACCATCGAAAATGTAAAAGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAA 785341
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | ||| || ||||| | || || | || |||||| || || ||
Sbjct 785340 CAGCGTCTAATTTTCGCTGGAAAACAATTAGAAGATGGACGTACCCTCTCTGATTATAAT 785281
Query 40870 ATCCAGAA 40877
||||||||
Sbjct 785280 ATCCAGAA 785273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515178845456160
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