Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq202 136 3e-27 >seq202 Length=497029 Score = 136 bits (150), Expect = 3e-27 Identities = 170/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 97397 CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTT 97456 |||| || ||||||||| |||| |||||||| |||||||| |||||||| || ||||||| Sbjct 1080 CTTG-TACTCTGCTCCATAATGTCTCCATTGAAATCCATATACAGGTCCCAGATCTCCTT 1022 Query 97457 CTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAA 97516 ||||||| ||| || ||| ||||| || | | || | |||||||||||||| Sbjct 1021 CTTCTCTGTCAGTAAATCCACAAGAATCTAGGTATGTACGCGAACTATTTGCATCCCAAA 962 Query 97517 TGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACA 97576 | || ||| ||| | |||||| | || |||||| | |||||||| |||| Sbjct 961 TATGAACATTCTTCTCTGATAACTCTTTTGCATTTGTGGATCCTTTTATAAACCATAACA 902 Query 97577 ATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 ||||||| || || || |||||||| ||| || || ||||| | ||||| Sbjct 901 ATTCTTCTACTACTCCCCTCCAAAACACTTGTTTTGTAGTTAATAATGGAAA 850 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 || || || || | ||| ||||||| || ||||| || |||||||| || || || Sbjct 1451 GTAACGTGAGCTAACATGTAAGTTAACAGTGAATACGATGCTATGTTAAATGGTACTCCA 1392 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || ||||| || || ||||||||| ||||| || || | | ||||| || |||||| Sbjct 1391 AGACCCATGTCGGCGCTTCTTTGATACAACTGGCACGATAATTCTCCATTACTTACATAA 1332 Query 97237 AACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCA 97295 ||||| ||| ||| ||||| || || || ||||||||||| | ||| | ||||| Sbjct 1331 AACTGTA-CAAAACAATGACATGGAGGTAAAGCCATTTTTGGTATATCAACTGGGTTCCA 1273 Query 97296 AGCACACATCAACATTCTTCTATC 97319 || |||| | ||||| ||||| Sbjct 1272 TGCTGACATTATTATTCTCCTATC 1249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346757517189620