Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq202 136 3e-27
>seq202
Length=497029
Score = 136 bits (150), Expect = 3e-27
Identities = 170/232 (73%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 97397 CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTT 97456
|||| || ||||||||| |||| |||||||| |||||||| |||||||| || |||||||
Sbjct 1080 CTTG-TACTCTGCTCCATAATGTCTCCATTGAAATCCATATACAGGTCCCAGATCTCCTT 1022
Query 97457 CTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAA 97516
||||||| ||| || ||| ||||| || | | || | ||||||||||||||
Sbjct 1021 CTTCTCTGTCAGTAAATCCACAAGAATCTAGGTATGTACGCGAACTATTTGCATCCCAAA 962
Query 97517 TGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACA 97576
| || ||| ||| | |||||| | || |||||| | |||||||| ||||
Sbjct 961 TATGAACATTCTTCTCTGATAACTCTTTTGCATTTGTGGATCCTTTTATAAACCATAACA 902
Query 97577 ATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628
||||||| || || || |||||||| ||| || || ||||| | |||||
Sbjct 901 ATTCTTCTACTACTCCCCTCCAAAACACTTGTTTTGTAGTTAATAATGGAAA 850
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
|| || || || | ||| ||||||| || ||||| || |||||||| || || ||
Sbjct 1451 GTAACGTGAGCTAACATGTAAGTTAACAGTGAATACGATGCTATGTTAAATGGTACTCCA 1392
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236
|| ||||| || || ||||||||| ||||| || || | | ||||| || ||||||
Sbjct 1391 AGACCCATGTCGGCGCTTCTTTGATACAACTGGCACGATAATTCTCCATTACTTACATAA 1332
Query 97237 AACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCA 97295
||||| ||| ||| ||||| || || || ||||||||||| | ||| | |||||
Sbjct 1331 AACTGTA-CAAAACAATGACATGGAGGTAAAGCCATTTTTGGTATATCAACTGGGTTCCA 1273
Query 97296 AGCACACATCAACATTCTTCTATC 97319
|| |||| | ||||| |||||
Sbjct 1272 TGCTGACATTATTATTCTCCTATC 1249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346757517189620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |