Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq453 338 9e-88 seq467 156 6e-33 seq321 132 7e-26 seq202 129 9e-25 seq459 123 4e-23 seq307 123 4e-23 >seq453 Length=4956680 Score = 338 bits (374), Expect = 9e-88 Identities = 568/817 (70%), Gaps = 17/817 (2%) Strand=Plus/Minus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 || ||||| ||||| ||||||| ||||||||| || |||| |||||||| Sbjct 2752264 CCTACATAACCATTAGGATCACAGCCATCTATACTGTACTTATTATTTAAATAAATAGCC 2752205 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 || || ||| || |||| ||||||||||| |||||||| |||||||||||| Sbjct 2752204 CATTGTAAGGCACTTTCAGGAGATTCAGTCCATTCTAAAATTTTTTTTGCCCAATACATT 2752145 Query 202988 CTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAAA 203047 || | | | || |||||||| || || | |||||| ||||| |||||||||||||| Sbjct 2752144 CTCAGAAAACCGTGCATTTTGCCTATCATTACCATTTGATTTTGACATGCATTCCATAAA 2752085 Query 203048 TTGTCATGAGTTAATGCATTTTCAAGTTGATATAAACTATATATATGTTTTCTAGTATCA 203107 | ||||||||| | |||||| | ||| | |||| ||||| || ||||| |||| Sbjct 2752084 TCATCATGAGTTTCAGAATTTTCTAATTGGTCTAAAGAATATAAATACTTTCTTTTATCT 2752025 Query 203108 TTTTTATGTTCATTTAGTGTTTTTATTGCCCAATTATTAGCACCATTTATATTATCGTAA 203167 || ||||| || || ||||| ||||| |||| || ||| || | ||| ||| || Sbjct 2752024 TTCCGATGTTTATCTAATGTTTCTATTGTCCAAGGATAAGCTCCTTCAATAAGATCATAC 2751965 Query 203168 TTTTCATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCTTCACAA 203227 |||| ||| || | ||||||||||| | ||||||| |||||||| |||||||| Sbjct 2751964 TTTTTATTGTAGAAGCAAAAATTATCGCTTAGTTCTCGTCGAATAATGGCTTCTTCCATG 2751905 Query 203228 AAAACTTCTACCGATTTAGGATATAATTTTTTATATTTGTTAATTTCTAATATTATTCTT 203287 ||| ||| || ||||| |||| || |||||| |||| | |||||||| || | | Sbjct 2751904 AAAGATTCAACAGATTTTGGATGTATTTTTTTGTATTCCGTTATTTCTAAAATGCAACGT 2751845 Query 203288 TGAGTTGAAATTTGACCAAAATGTATCCATGGTGATAAATTACTTATTGCATTAGCATTT 203347 || ||| || ||||||||| | ||| || || ||||| || | ||||| || Sbjct 2751844 TGTACTGATATCATACCAAAATGAAACCAAGGAGACAAATTGCTAAGAGCATTTGCTAAA 2751785 Query 203348 GGATCATTTCtttttttagcataatcttttaatctattttgtataaatatatctaatatt 203407 ||||| || | || | ||||| | ||||| | ||||||| ||| | |||||| | Sbjct 2751784 GGATCGTTGCGTTCGGTCGCATACTTTTTTATACCGTTTTGTAAAAAATTTTCTAATGCT 2751725 Query 203408 ttaaatgcatattttGTACCAGATTTTGCCCAAG-AAACAGGTTTA---ACATTTCTATC 203463 || | |||| | || | || ||||| | || | | || |||| |||| Sbjct 2751724 TTGACACCATACTCATAGCCTGGCTTAGCCCATGTAATCTCATCTACAGACATATCTACT 2751665 Query 203464 AATATTTAATGATTGTTCTGCttttttccaattatt--atttattttaatatatgtatta 203521 |||| | |||| || |||| ||||||||| || | | | | || | |||| Sbjct 2751664 GATATAT----TTTGTAGAGCCTTTTCCCAATTATTTCCTTCAATCTTAGAT-TTTATTT 2751610 Query 203522 taagt--atgtttaataataggtataaattCAGTTAAATATTCTGATAATTTATAATTTA 203579 | || |||||| |||| |||| |||||| ||||| |||| |||||| ||||| Sbjct 2751609 TGTGTGGATGTTTTATAACAGGTGGAAATTCTGTTAAGAATTCCTCTAATTTTGTATTTA 2751550 Query 203580 TTTTATTTCTAATGGTTTTTGCAGAATATT-CTAATTTATTACTAGCAATCCAACATGGT 203638 ||||| ||||||| ||| | |||| ||||| || ||| | | |||||||| || ||| Sbjct 2751549 TTTTACTTCTAATTGTTCTAGCAGCATATTCCTGCTTTGATGAT-GCAATCCAGCAAGGT 2751491 Query 203639 ACAATATTATGTGAATCAACTTGATAAACATCAATAT 203675 ||||||||||||| ||| || | |||| | ||||| Sbjct 2751490 ACAATATTATGTGCATCCACCT--TAAAGAGAAATAT 2751456 Score = 127 bits (140), Expect = 3e-24 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 202740 ATTTTTTAATAAATAAATCAACATCAAATTTACGTCTACATCCTTCATAACTCATATATC 202799 ||||| ||||||| | |||||||||||| ||| | |||||||||||| |||| |||| Sbjct 2752466 ATTTTAAAATAAATTCTTTAACATCAAATTTTCGTTTGCATCCTTCATAATTCATGTATC 2752407 Query 202800 TAATTTTACCAAATATTGGTCTTTCTTTCCATGCTCTATCATGAATACCACAAATTGACC 202859 | ||||| ||||||||| |||||||| ||| || ||||||||| ||||| || |||| Sbjct 2752406 TTATTTTTCCAAATATTTGTCTTTCTGACCAACCTTGATCATGAATGCCACATATAGACC 2752347 Query 202860 ACATACATCC 202869 ||||||| || Sbjct 2752346 ACATACAACC 2752337 Score = 89.7 bits (98), Expect = 8e-13 Identities = 189/273 (69%), Gaps = 7/273 (3%) Strand=Plus/Minus Query 203714 ATTTTAATAGGATAAAAATCAACAATCAATACACCAATATTATAtttttttATAAATTTT 203773 || ||||| |||| |||||| |||||| | || || ||| | ||||| ||||||| Sbjct 2751336 ATCTTAAT-GGATTAAAATCTGCAATCACAGCTCCCATTCTATGTGCTTTTACAAATTTT 2751278 Query 203774 GGTAATACATCTACT-GATATTCCTATCAATAGATGAAAATGTATATTTAAATTTTTACA 203832 ||| | || | | | || |||| |||||||||| |||||| | ||||||||| Sbjct 2751277 AA-AATGCTCATATTTGGTTCACCATTCAAAAGATGAAAATTTATATTGAGATTTTTACA 2751219 Query 203833 TTCTTCTTCCA-TTTGTTTAACACCATTCAACATAAAATCAAATTGTCTAATTGTAGCAT 203891 ||| || || | ||| |||| || || || | ||| | | | | || || | ||||| Sbjct 2751218 TTCCTCCTCAACTTTCATTAAT-CCTTTTAAAAGAAATTTATAATATCGTATGGAAGCAT 2751160 Query 203892 TAAGAAATTCTGGTACTAAACATATACACATATGTAATGACGATTTTGATTTTAATGCTA 203951 |||||| ||| | || ||| | ||| ||||| | | | || ||||||||| | Sbjct 2751159 AAAGAAAACTTGGCATTATACAGAAACATATATGAAGAGGCACATTATTTTTTAATGC-A 2751101 Query 203952 ATTCTT-GTGCATAAATTAAACCCCAATTATCT 203983 ||||| | ||| ||| ||| ||||||||||| Sbjct 2751100 GTTCTTTGAGCAAAAAGCAAAGCCCAATTATCT 2751068 >seq467 Length=2555529 Score = 156 bits (172), Expect = 6e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | || || || || || ||||||||||| | || |||| ||| Sbjct 1364842 AATGCAGATATTCGTGAAAACCCTTACTGGAAAAACTATAACCTTGGAAGTTGAGGCATC 1364783 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| |||| |||||||| || ||||||||||| || || ||||| Sbjct 1364782 TGACACCATTGAGAATGTAAAGGCTAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCA 1364723 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || ||||| || ||||||||||| ||| | || || ||| ||||| || Sbjct 1364722 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACAA 1364663 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||||||| | ||| | || | ||| | || |||||||| Sbjct 1364662 TATTCAAAAAGAATCAACCCTTCATCTTGTACTCCGTCTCCGTGGTGGTAT 1364612 Score = 150 bits (166), Expect = 3e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || |||||||| | || || || || || ||| | || | |||||| Sbjct 1366115 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTCGAAGTGGAAGCATC 1366056 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||||||| ||| | ||| |||||||| || ||||||||||| || || ||||| Sbjct 1366055 AGATACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCA 1365996 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || ||||| || ||||||||||| ||| | || || ||| ||||| || Sbjct 1365995 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACAA 1365936 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||||||| | ||| | || | ||| | || ||||| || Sbjct 1365935 TATTCAAAAAGAATCAACCCTTCATCTTGTACTCCGTCTCCGTGGTGGAAT 1365885 Score = 138 bits (152), Expect = 2e-27 Identities = 174/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | || || || || || ||||||||||| | || |||| ||| Sbjct 1365431 AATGCAGATATTCGTGAAAACCCTTACTGGAAAAACTATAACCTTGGAAGTTGAGGCATC 1365372 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| |||| |||||||| || ||||||||||| || || || || Sbjct 1365371 TGACACCATTGAGAATGTAAAGGCTAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCA 1365312 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| ||| | |||||||| || |||||||| || ||| | || |||||| || ||||| Sbjct 1365311 ACAGAGGTTGATTTTTGCTGGCAAACAATTGGAAGATGGACGCACATTATCTGACTATAA 1365252 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| ||||| || || | ||| | || | ||| | || |||||||| ||| || Sbjct 1365251 CATTCAGAAAGAGTCGACACTCCATCTTGTACTTCGTCTCCGTGGTGGTATGCAAATTT 1365193 Score = 123 bits (136), Expect = 4e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || |||||||| | || || || || || ||| | || ||||||| Sbjct 1366343 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTTGAAGTTGAAGCCTC 1366284 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | ||| |||||||| |||||||| ||||| || || || || Sbjct 1366283 AGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAGGGTATTCCTCCAGACCA 1366224 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| || || || || || |||||||| || ||| | || |||||| || || || Sbjct 1366223 ACAAAGACTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACATTATCTGACTACAA 1366164 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| ||||| ||| | || | || | ||| | || ||||| || Sbjct 1366163 TATTCAAAAGGAATCTACTCTTCACCTTGTGCTCCGTCTCCGTGGTGGAAT 1366113 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| || || || ||||| |||||| | || |||| || Sbjct 1364386 AATGCAAATTTTTGTGAAGACTCTTACTGGAAAAACCATAACTCTGGAAGTTGAGGCGTC 1364327 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| || | || ||||||||||| |||||||| || ||||| ||||| Sbjct 1364326 TGACACTATTGAAAACGTGAAGGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 1364267 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | || || || || |||||| | || ||| |||| ||| | ||||| || Sbjct 1364266 GCAGAGATTAATCTTCGCTGGTAAACAACTGGAAGATGGTCGTACACTTTCTGATTACAA 1364207 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGT 124747 |||||| |||||||| ||| | ||||| || Sbjct 1364206 TATTCAGAAAGAATCTACTCTCCATTTAGT 1364177 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 124635 AAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGAT 124694 ||||||||||| || || ||||||||||| | || ||||| || ||||||||||| ||| Sbjct 1365092 AAAGAAGGTATTCCTCCAGATCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGAT 1365033 Query 124695 AGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGT 124754 | || || ||| ||||| |||||||||||||||||||| | ||| | || | ||| Sbjct 1365032 GGACGCACGTTATCCGATTACAATATTCAAAAAGAATCAACCCTTCATCTTGTACTCCGT 1364973 Query 124755 TTACGAGGTGGTAT 124768 | || |||||||| Sbjct 1364972 CTCCGTGGTGGTAT 1364959 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | || || || || || ||||||||||| | || |||| || Sbjct 1365659 AATGCAGATATTCGTGAAAACCCTTACTGGAAAAACTATAACCTTGGAAGTTGAGGCGTC 1365600 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | ||| ||||| || || || |||||||| || || || || Sbjct 1365599 AGACACCATTGAAAATGTGAAAGCTAAAATCCAGGACAAGGAAGGTATCCCTCCAGACCA 1365540 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | || ||||| || || ||||| || ||| | || ||| | |||||||| Sbjct 1365539 GCAGAGATTAATCTTTGCTGGCAAGCAATTGGAAGATGGACGTACACTTTCTGATTATAA 1365480 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| |||||||||||||| | ||| | ||| | ||| | || ||||| || Sbjct 1365479 TATCCAAAAAGAATCAACCCTTCATCTCGTTCTCCGTCTCCGTGGTGGAAT 1365429 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || |||| ||||| || || ||||| ||||| | || |||| || Sbjct 1365887 AATGCAGATCTTCGTAAAAACACTTACTGGAAAAACAATAACATTGGAAGTTGAGGCGTC 1365828 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| || | ||| ||||| || || || |||||||| || || || || Sbjct 1365827 CGATACCATTGAAAACGTGAAAGCTAAAATCCAGGACAAGGAAGGTATCCCTCCAGACCA 1365768 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | || ||||| || || ||||| || ||| | || ||| | |||||||| Sbjct 1365767 GCAGAGATTAATCTTTGCTGGCAAGCAATTGGAAGATGGACGTACACTTTCTGATTATAA 1365708 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| |||||||||||||| | ||| | ||| | ||| | || ||||| || Sbjct 1365707 TATCCAAAAAGAATCAACCCTTCATCTCGTTCTCCGTCTCCGTGGTGGAAT 1365657 Score = 104 bits (114), Expect = 4e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| || || |||||||| | || || ||||| ||||| | ||| |||| ||| Sbjct 1366573 ACCATGCAGATTTTCGTAAAGACATTGACGGGAAAAACCATAACCCTCGAGGTTGAGGCA 1366514 Query 124596 AATGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGA 124654 || || || ||| ||||| || ||||| || |||||||| || || ||||| || Sbjct 1366513 TCAGACACCATCGAGAATGTTAAAGCA-AAAATCCAGGATAAAGAGGGCATCCCACCAGA 1366455 Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTA 124714 ||| || || | || || || || ||||||||||| ||| | || ||| | || || Sbjct 1366454 TCAGCAGAGATTGATCTTCGCTGGTAAACAATTAGAAGATGGACGCACACTTTCTGACTA 1366395 Query 124715 TAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| ||||| || | || | || | ||| | || ||||| || Sbjct 1366394 CAATATACAAAAGGAATCTACACTTCACCTTGTACTCCGTCTCCGTGGTGGAAT 1366341 >seq321 Length=1097274 Score = 132 bits (146), Expect = 7e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| ||||| | || || | || ||||||||||| || | ||| | ||||| Sbjct 785463 ACGATGCAGATATTCGTGAAAACTTTGACGGGCAAAACTATCACGCTCGAGGTAGAAGCG 785404 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 |||||| || ||| ||||| |||||||||||||||||||| || ||||||||| Sbjct 785403 TCTGATACCATCGAAAATGTAAAAGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGAT 785344 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 ||||| | || ||||| || |||||||||||||| ||| | || || | |||||| Sbjct 785343 CAACAGCGTCTAATTTTCGCTGGAAAACAATTAGAAGATGGACGTACCCTCTCTGATTAT 785284 Query 124716 AATATTCAAAAAG 124728 ||||| || |||| Sbjct 785283 AATATCCAGAAAG 785271 >seq202 Length=497029 Score = 129 bits (142), Expect = 9e-25 Identities = 181/252 (72%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 205709 TATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAA 205768 ||||||| |||| ||| | | || | || ||| |||| | ||||||||| ||||| | Sbjct 1099 TATAATTAGTATGCATGTTCTTGTACTCTGCTCCATAATGTCTCCATTGAAATCCATATA 1040 Query 205769 CTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatg 205828 | || || | ||| ||||||| ||| ||| |||| |||| | || ||| | | Sbjct 1039 CAGGTCCCAGATCTCCTTCTTCTCTGTCAGTAAATCCACAAGAATCTAGGTATGTACGCG 980 Query 205829 atccattttcatcccaaatatggattcctttattttttaGAATA--TTTGTATTAGTTGA 205886 | | |||| ||||||||||||| | | || | | | | || |||| ||| || || Sbjct 979 AACTATTTGCATCCCAAATATGAA--CATTCTTCTCTGATAACTCTTTTGCATTTGTGGA 922 Query 205887 TCCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGT 205946 ||| |||||||||||| |||||||| || | ||| |||||||||| | |||||| || Sbjct 921 TCCTTTTATAAACCATAACAATTCTTCTACTACTCCCCTCCAAAACACTTGTTTTGTAGT 862 Query 205947 AAATAATGGaaa 205958 ||||||||||| Sbjct 861 TAATAATGGAAA 850 Score = 105 bits (116), Expect = 1e-17 Identities = 139/191 (73%), Gaps = 5/191 (3%) Strand=Plus/Minus Query 205489 TTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATAT 205548 ||||||||||| || | |||||| || || ||||||||||| || || | ||| Sbjct 1406 TTAAATGGTACTCCAAGACCCATGTCGGCGCTTCTTTGATACAACTGGCACG----ATAA 1351 Query 205549 TTATT-ATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTC 205607 || | |||| |||||| ||| ||||||||||||||||| || |||| | |||| ||| Sbjct 1350 TTCTCCATTACTTACATAAAACTGTACAAAACAATGACATGGAGGTAAAGCCATTTTTGG 1291 Query 205608 AACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttat 205667 | ||| | || ||||| |||| | |||||| | ||| | ||| || |||||| Sbjct 1290 TATATCAACTGGGTTCCATGCTGACATTATTATTCTCCTATCATTAGGAGAATGTTTTAT 1231 Query 205668 tttatttatAA 205678 ||| ||||||| Sbjct 1230 TTTGTTTATAA 1220 >seq459 Length=558815 Score = 123 bits (136), Expect = 4e-23 Identities = 103/126 (82%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 ||| || |||||||| |||||||| | |||||||| ||||| ||||| || ||| || | Sbjct 439502 AGGAATTCCACCTGACCAACAAAGATTAATTTTTGCTGGAAAGCAATTGGAAGATGGTAG 439443 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACG 124759 ||| | |||||||||||||||||| ||||| || |||||||| || ||||||||| | Sbjct 439442 AACTCTGTCAGATTATAATATTCAAAAGGAATCTACATTGCATTTAGTCTTACGTTTAAG 439383 Query 124760 AGGTGG 124765 |||||| Sbjct 439382 AGGTGG 439377 >seq307 Length=2169461 Score = 123 bits (136), Expect = 4e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | |||||||| ||||| ||||| || || | || | ||||| Sbjct 1514524 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCTTC 1514583 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| | ||| || || |||||||||||||| || || |||||||| Sbjct 1514584 AGATACGATAGAGAATGTCAAAGCTAAGATCCAAGATAAAGAAGGAATTCCTCCTGATCA 1514643 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||| ||||| || | || ||| | | ||| | ||||||||| Sbjct 1514644 GCAACGATTAATCTTTGCTGGAAAGCAGCTGGAAGATGGAAGGACACTTTCAGATTATAA 1514703 Query 124718 TATTCAAAAAGAATCAAC 124735 |||||||||||||||||| Sbjct 1514704 TATTCAAAAAGAATCAAC 1514721 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | |||||||| ||||| ||||| || ||| | || | ||||| Sbjct 1509862 AATGCAAATCTTCGTGAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1509921 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| |||||| ||| |||| ||| || || || ||||| || || || || || || Sbjct 1509922 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1509981 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || |||||||| || || | || ||| | | ||| | ||||||||| Sbjct 1509982 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510041 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| ||||| || | | ||||| || || Sbjct 1510042 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510092 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | |||||||| ||||| ||||| || ||| | || | ||||| Sbjct 1515215 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1515274 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| |||||| ||| |||| || || || || ||||| || || || ||| |||| Sbjct 1515275 TGACACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATTCCCCCTCATCA 1515334 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||| || |||||| | || ||| | | ||| | ||||| || Sbjct 1515335 GCAACGATTAATCTTTGCTGGGAAACAACTTGAAGATGGAAGGACACTCTCTGATTACAA 1515394 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| ||||||| | | ||||| || || Sbjct 1515395 CATTCAAAAAGAATCCACACTTCATCTGGTTTTGAGACTTCGAGGAGGAAT 1515445 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| || ||||| |||||||| || |||| | ||||| Sbjct 1515443 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1515502 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | ||| || || ||||| |||||||| || || || || || Sbjct 1515503 AGACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACCA 1515562 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||||||||| || | || ||| | | ||| | ||||||||| Sbjct 1515563 GCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTGTCAGATTATAA 1515622 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| ||||| || | | ||||| || || Sbjct 1515623 CATTCAAAAAGAATCCACCCTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1515673 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| || ||||| |||||||| || |||| | ||||| Sbjct 1510546 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1510605 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | ||| || || ||||| |||||||| || || || || || Sbjct 1510606 AGACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACCA 1510665 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || |||||||| || || | || ||| | | ||| | ||||||||| Sbjct 1510666 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510725 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| ||||| || | | ||||| || || Sbjct 1510726 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510776 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| || ||||| ||||| || || | || | ||||| Sbjct 1510090 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510149 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| |||||| ||| |||| ||| || || || ||||| || || || || || || Sbjct 1510150 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1510209 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || |||||||| || || | || ||| | | ||| | ||||||||| Sbjct 1510210 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510269 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| ||||| || | | ||||| || || Sbjct 1510270 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510320 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| || ||||| ||||| || || | || | ||||| Sbjct 1510318 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510377 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| |||||| ||| |||| ||| || || || ||||| || || || || || || Sbjct 1510378 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1510437 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || |||||||| || || | || ||| | | ||| | ||||||||| Sbjct 1510438 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510497 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| ||||| || | | ||||| || || Sbjct 1510498 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510548 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| || ||||| ||||| || || | || | ||||| Sbjct 1514752 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1514811 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| |||||| ||| |||| ||| || || || ||||| || || || || || || Sbjct 1514812 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1514871 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || |||||||| || || | || ||| | | ||| | ||||||||| Sbjct 1514872 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1514931 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| ||||| || | | ||||| || || Sbjct 1514932 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1514982 Score = 96.9 bits (106), Expect = 5e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| || ||||| ||||| || || | || | ||||| Sbjct 1515671 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515730 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| ||||| ||| | ||| || || || || ||||| || ||||| || ||||| Sbjct 1515731 TGACACAATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAGGGAATACCTCCAGATCA 1515790 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||||||||| || | || ||| | | ||| | ||||| || Sbjct 1515791 GCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTCTCTGATTACAA 1515850 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 |||||||||||||| || | ||| ||||| Sbjct 1515851 CATTCAAAAAGAATCCACACTTCATCTGGTT 1515881 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | |||||||| ||||| || || || || | || | ||||| Sbjct 1509635 ATGCAGATCTTTGTCAAGACACTTACAGGGAAGACCATCACCCTGGAAGTCGAAGCTTCA 1509694 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | || ||| || || || ||||| || || || || || || Sbjct 1509695 GATACGATAGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 1509754 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || |||||||| || || | || ||| | | ||| | ||||||||| Sbjct 1509755 CAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAAC 1509814 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| ||||| || | | ||||| || || Sbjct 1509815 ATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1509864 Score = 87.8 bits (96), Expect = 3e-12 Identities = 142/205 (69%), Gaps = 7/205 (3%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| || ||||| ||||| || || | || | ||||| Sbjct 1514980 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515039 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| |||||| ||| |||| || || || || ||||| || || || || || || Sbjct 1515040 TGACACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1515099 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGA-------AG 124710 ||| | | || |||||||| || || | || ||| | | ||| | | || Sbjct 1515100 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTCAACACTCTCAG 1515159 Query 124711 ATTATAATATTCAAAAAGAATCAAC 124735 ||||||||||||||||||||||||| Sbjct 1515160 ATTATAATATTCAAAAAGAATCAAC 1515184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755396828908800