Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq467 122 8e-23
seq307 107 2e-18
seq321 96.9 3e-15
>seq467
Length=2555529
Score = 122 bits (134), Expect = 8e-23
Identities = 159/214 (74%), Gaps = 7/214 (3%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGC 118592
||| | |||||| || ||||| || ||||| || | |||| |||| ||| || |
Sbjct 1366367 GTGAAGTGTAGATTCCTTTTGTATATTGTAGTCAG--AAAGTGTGCGTCCATCTTCTAAT 1366424
Query 118593 TGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATT 118652
||||| |||||| |||| | | ||||||||| || || |||||||| || || |||
Sbjct 1366425 TGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGATT 1366484
Query 118653 TTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCC 118711
||| |||||| | |||| |||||| | ||| ||| ||||||| ||| | ||||| ||
Sbjct 1366485 TTTGCTTTAACATTCTCGATGGTGTCTGATGC-CTCAACCTCGAGGGTTATGGTTTTTCC 1366543
Query 118712 GGTCAGAGTTTTTACAAAAATCTGCATGGCTTAT 118745
|||| || ||||| ||||||||||||| ||||
Sbjct 1366544 CGTCAATGTCTTTACGAAAATCTGCATGG-TTAT 1366576
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| ||| |||||||| ||||||||||| || | |||||| ||| || |
Sbjct 1364406 CAAGATGGAGTGTTGACTCTTTCTGAATGTTGTAGTCAGATAGTGTGCGCCCATCTTCTA 1364465
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
||| || |||||| |||| | | ||||| || || || ||||| || || || |
Sbjct 1364466 ACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGA 1364525
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|||| ||||| | || | ||||| | ||| ||| || || | || | || ||
Sbjct 1364526 TTTTAGCCTTAACGTTCTCAATAGTGTCTGATGC-CTCAACTTCCAAAGTAATGGTCTTT 1364584
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || |||||||| ||||| ||||||||
Sbjct 1364585 CCAGTAAGAGTTTTCACAAAGATCTGCAT 1364613
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || ||||||||||| ||||||||| | ||||| ||| || | ||||| |||
Sbjct 1364645 GTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCA 1364704
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | || ||||| ||||| || || || ||||| |||||| ||
Sbjct 1364705 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTAGCCTTT 1364764
Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | || | |||||| | ||| ||| || || | ||| | ||||| || || || ||
Sbjct 1364765 ACATTCTCAATGGTGTCAGATGC-CTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGT 1364823
Query 118721 TTTTACAAAAATCTGCAT 118738
||| || || ||||||||
Sbjct 1364824 TTTCACGAATATCTGCAT 1364841
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || ||||||||||| ||||||||| | ||||| ||| || | ||||| |||
Sbjct 1365918 GTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCA 1365977
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | || ||||| ||||| || || || ||||| |||||| ||||
Sbjct 1365978 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTGGCTTTA 1366037
Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | ||| | || || | |||| || || |||| || | || || || |||| ||
Sbjct 1366038 ACATTTTCAATTGTATCTGATGCT-TCCACTTCGAGAGTGATGGTCTTTCCAGTCAATGT 1366096
Query 118721 TTTTACAAAAATCTGCAT 118738
||||| || ||||||||
Sbjct 1366097 CTTTACGAAGATCTGCAT 1366114
>seq307
Length=2169461
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||||| |||| || | ||| || ||||||||||||||||||||
Sbjct 1515898 CCTCCCCGAAGTCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAG 1515839
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || | | ||| |||||||| ||||| || |||| | || |||||||| ||||||
Sbjct 1515838 AGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGT 1515779
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690
|| ||||| ||||| || || ||| || | || | ||||| | ||| |||||
Sbjct 1515778 ATTCCCTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCT-TCGAC 1515720
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || || ||||| || || || || |||||
Sbjct 1515719 TTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1515672
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||||| ||| | ||| | ||| || ||||||||||| || |||| ||
Sbjct 1514751 CCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAAT--CTG 1514694
Query 118572 ATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||| | | ||| || ||||| |||||||| |||| | || |||||||| ||||
Sbjct 1514693 AAAGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAGATTAATCGTTGCTGATCAGGAG 1514634
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || || || || ||| || || ||| || | || | || || | ||| |||
Sbjct 1514633 GAATTCCTTCTTTATCTTGGATCTTAGCTTTGACATTCTCTATCGTATCTGAAGCT-TCG 1514575
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | ||| | ||||| || || || || || ||||| || |||||
Sbjct 1514574 ACTTCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1514525
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | |||||| |||| || | ||| || ||||||||||||||||||| |
Sbjct 1515442 CCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAAT--CAG 1515385
Query 118572 ATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||| | | ||| || || ||||| ||||| |||| | || ||||||| || |
Sbjct 1515384 AGAGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGG 1515325
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || ||||| ||||| || ||| || || | ||| | ||||| | ||| |||
Sbjct 1515324 GAATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCT-TCG 1515266
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | || | ||||| || || || || || ||||| || |||||
Sbjct 1515265 ACTTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1515216
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||| | |||| || | ||| || |||||||||||||| |||| ||
Sbjct 1510317 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAAT--CTG 1510260
Query 118572 ATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||| | | ||| |||||||| || || || |||| | || ||||| || ||||
Sbjct 1510259 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1510200
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || ||||| ||||| || || || || | ||| | ||||| | ||| |||
Sbjct 1510199 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCT-TCG 1510141
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | ||| | ||||| || || ||||| || || || || |||||
Sbjct 1510140 ACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1510091
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||| | |||| || | ||| || |||||||||||||| |||| ||
Sbjct 1510545 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAAT--CTG 1510488
Query 118572 ATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||| | | ||| |||||||| || || || |||| | || ||||| || ||||
Sbjct 1510487 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1510428
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || ||||| ||||| || || || || | ||| | ||||| | ||| |||
Sbjct 1510427 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCT-TCG 1510369
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | ||| | ||||| || || ||||| || || || || |||||
Sbjct 1510368 ACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1510319
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||| | |||| || | ||| || |||||||||||||| |||| ||
Sbjct 1514979 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAAT--CTG 1514922
Query 118572 ATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||| | | ||| |||||||| || || || |||| | || ||||| || ||||
Sbjct 1514921 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1514862
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || ||||| ||||| || || || || | ||| | ||||| | ||| |||
Sbjct 1514861 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCT-TCG 1514803
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | ||| | ||||| || || ||||| || || || || |||||
Sbjct 1514802 ACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1514753
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||| | |||| || | || || |||||||||||||| ||||| |
Sbjct 1515670 CCTCCTCGAAGTCTTAGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGAC 1515611
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || | | ||| |||||||| ||||| || |||| | || ||||| || |||||
Sbjct 1515610 AGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGA 1515551
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || || |||||| || || ||| || | || | ||||| | | || ||
Sbjct 1515550 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACT 1515491
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || || ||||| || || || || |||||
Sbjct 1515490 TCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||| | |||| || | ||| || |||||||||||||| |||| ||
Sbjct 1510773 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAAT--CTG 1510716
Query 118572 ATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||| | | ||| |||||||| || || || |||| | || ||||| || ||||
Sbjct 1510715 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1510656
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || |||||| || || ||| || | || | ||||| | | || |
Sbjct 1510655 GAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCA 1510596
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | ||| | ||||| || || ||||| || || || || |||||
Sbjct 1510595 CTTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547
Score = 84.2 bits (92), Expect = 2e-11
Identities = 163/237 (69%), Gaps = 13/237 (5%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||||| ||| | ||| | ||| || ||||||||||| || |||| ||
Sbjct 1515214 CCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAAT--CTG 1515157
Query 118572 ATAGTG-CGCGT--------ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGA 118622
| |||| | || ||| |||||||| || || || |||| | || |||||
Sbjct 1515156 AGAGTGTTGAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGG 1515097
Query 118623 TCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-T 118681
|| ||||| || ||||| ||||| || ||| || || | ||| | ||||| |
Sbjct 1515096 TCTGGAGGGATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAA 1515037
Query 118682 GCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| || | ||| | ||||| || || ||||| || || || || |||||
Sbjct 1515036 GCT-TCGACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1514981
>seq321
Length=1097274
Score = 96.9 bits (106), Expect = 3e-15
Identities = 111/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 118593 TGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATT 118652
|||||||||||| | || |||||||| ||||| || || || || || || ||| ||||
Sbjct 785315 TGTTTTCCAGCGAAAATTAGACGCTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATT 785374
Query 118653 TTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCC 118711
|| ||| || | ||||| ||| || | ||| || ||||||| || | ||||||||
Sbjct 785375 TTAGCTTTTACATTTTCGATGGTATCAGACGCT-TCTACCTCGAGCGTGATAGTTTTGCC 785433
Query 118712 GGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| |||||| || || ||||||||
Sbjct 785434 CGTCAAAGTTTTCACGAATATCTGCAT 785460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433797269728072
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