Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq129 109 6e-19 seq2434 107 2e-18 seq64 107 2e-18 seq519 104 3e-17 seq307 104 3e-17 seq61 104 3e-17 seq133 95.1 1e-14 seq467 93.3 5e-14 seq453 87.8 2e-12 >seq129 Length=5769472 Score = 109 bits (120), Expect = 6e-19 Identities = 74/83 (89%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2290220 AAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2290161 Query 60117 TCACCACTATACTACCGAGGATT 60139 | ||||||||||||||||||||| Sbjct 2290160 TAACCACTATACTACCGAGGATT 2290138 >seq2434 Length=9448 Score = 107 bits (118), Expect = 2e-18 Identities = 75/84 (89%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 || |||| || ||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 5546 AATAATTATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 5487 Query 60116 CTCACCACTATACTACCGAGGATT 60139 || ||||||||||||||||||||| Sbjct 5486 CTGACCACTATACTACCGAGGATT 5463 >seq64 Length=822164 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 388029 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 387970 Query 60126 TACTACCGAGGATT 60139 |||||||||||||| Sbjct 387969 TACTACCGAGGATT 387956 Score = 105 bits (116), Expect = 8e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 395339 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 395280 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 395279 ATACTACCGAGGA 395267 >seq519 Length=14764 Score = 104 bits (114), Expect = 3e-17 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 || |||| || ||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 582 AATAATTATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 523 Query 60116 CTCACCACTATACTACCGAGGA 60137 || ||||||||||||||||||| Sbjct 522 CTGACCACTATACTACCGAGGA 501 >seq307 Length=2169461 Score = 104 bits (114), Expect = 3e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||| | |||| || |||||||| |||||||||| || |||| | | || || Sbjct 1515880 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAGAGTGTCCTCCCATCTTCG 1515821 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | ||| ||||| || | || | | ||| |||||| | Sbjct 1515820 AGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGTATTCCCTCTTTGTCCTGG 1515761 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || ||||| || | | ||||| | ||| || || | ||||||||||| Sbjct 1515760 ATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1515701 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || ||||| || |||||||||||| Sbjct 1515700 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1515671 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||||| | | ||| |||| ||| | |||| || |||||||| |||||||||| Sbjct 1515443 TCCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGA 1515384 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||| | || || || || || ||||| || || | ||| ||||| | | || Sbjct 1515383 GAGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGG 1515324 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||| |||||| ||| ||| || | | | | ||||| | ||| || Sbjct 1515323 AATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1515264 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | ||||||||||| || || || ||||| ||||||||||||||| Sbjct 1515263 TTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCATT 1515215 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||| | |||| || |||||||| || ||||| | ||| |||| | || || Sbjct 1510755 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510696 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | ||| |||||||| | || | | || ||||| | Sbjct 1510695 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGG 1510636 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || ||||| || | | ||||| | |||||| || | ||||| ||||| Sbjct 1510635 ATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTC 1510576 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || ||||| || |||||||||||| Sbjct 1510575 CCTGTGAGAGTCTTCACGAAGATTTGCATT 1510546 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||| | ||| || |||||||| || ||||| | ||| |||| | | || || Sbjct 1515652 ACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTCCCATCTTCG 1515593 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | ||| |||||||| | || | | || ||||| | Sbjct 1515592 AGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGG 1515533 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || ||||| || | | ||||| | |||||| || | ||||| ||||| Sbjct 1515532 ATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTC 1515473 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || ||||| || |||||||||||| Sbjct 1515472 CCTGTGAGAGTCTTCACGAAGATTTGCATT 1515443 Score = 86.0 bits (94), Expect = 7e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||| | |||| || |||||||| || ||||| | ||| |||| | || || Sbjct 1510071 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510012 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | ||| |||||||| | || | | ||| |||||| | Sbjct 1510011 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1509952 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || || | | | | ||||| | ||| || || | ||||||||||| Sbjct 1509951 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGAGTGATGGTTTTC 1509892 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || ||||| || |||||||||||| Sbjct 1509891 CCTGTGAGTGTCTTCACGAAGATTTGCATT 1509862 Score = 86.0 bits (94), Expect = 7e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||| | |||| || |||||||| || ||||| | ||| |||| | || || Sbjct 1510299 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510240 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | ||| |||||||| | || | | ||| |||||| | Sbjct 1510239 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510180 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || || | | | | ||||| | ||| || || | ||||||||||| Sbjct 1510179 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510120 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || ||||| || |||||||||||| Sbjct 1510119 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1510090 Score = 86.0 bits (94), Expect = 7e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||| | |||| || |||||||| || ||||| | ||| |||| | || || Sbjct 1510527 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510468 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | ||| |||||||| | || | | ||| |||||| | Sbjct 1510467 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510408 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || || | | | | ||||| | ||| || || | ||||||||||| Sbjct 1510407 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510348 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || ||||| || |||||||||||| Sbjct 1510347 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1510318 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || ||||||||||| ||||| | || |||| | || || |||||||| ||||| || Sbjct 1514715 TCTTTTTGAATATTATAATCTGAAAGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAG 1514656 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | ||| ||||| || | || | | || || || ||| || ||||| || Sbjct 1514655 ATTAATCGTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGGATCTTAGCTTTGACATTC 1514596 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||| || | ||| || || | ||||||||||| || || || ||||| ||| Sbjct 1514595 TCTATCGTATCTGAAGCTTCGACTTCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACA 1514536 Query 43173 AAGATTTGCATT 43184 |||||||||||| Sbjct 1514535 AAGATTTGCATT 1514524 Score = 86.0 bits (94), Expect = 7e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||| | |||| || |||||||| || ||||| | ||| |||| | || || Sbjct 1514961 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1514902 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | ||| |||||||| | || | | ||| |||||| | Sbjct 1514901 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1514842 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || || | | | | ||||| | ||| || || | ||||||||||| Sbjct 1514841 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1514782 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || ||||| || |||||||||||| Sbjct 1514781 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1514752 >seq61 Length=1771752 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 510156 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 510097 Query 60126 TACTACCGAGGATTG 60140 |||||||||||| || Sbjct 510096 TACTACCGAGGAATG 510082 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 510998 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 510939 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 510938 TACTATCGAGGA 510927 >seq133 Length=1601264 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 293275 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 293216 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 293215 TACTATCGAGGA 293204 >seq467 Length=2555529 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| |||||||| |||| || || || | || |||| || ||||||||||| Sbjct 1366380 TCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCATCTTCTAATTGTTTACCAGCGAAG 1366439 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | || |||||| || | || | || ||| || ||| ||||||| ||| | || Sbjct 1366440 ATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGATTTTTGCTTTAACATTC 1366499 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| | || || |||| || |||||||| ||||| | |||||||| Sbjct 1366500 TCGATGGTGTCTGATGCCTCAACCTCGAGGGTTATGGTTTTTCCCGTCAATGTCTTTACG 1366559 Query 43173 AAGATTTGCAT 43183 || || ||||| Sbjct 1366560 AAAATCTGCAT 1366570 Score = 86.0 bits (94), Expect = 7e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 42955 GTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 43014 ||||||| || | || | || ||||| | || || || |||||||||||||||| Sbjct 1364157 GTCCTCCCCTGAGTCGAAGTACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAG 1364216 Query 43015 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCG 43074 || || || | || || || || ||||||||||| || | || |||||| || | | Sbjct 1364217 AAAGTGTACGACCATCTTCCAGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTG 1364276 Query 43075 GCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCC 43133 | | || || |||| | ||| |||||| || | | | | ||||| || || Sbjct 1364277 GAATGCCTTCTTTGT-CTTGAATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCA 1364335 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || | || |||||||| || || || ||||| ||||| ||||||||| Sbjct 1364336 ACTTCCAGAGTTATGGTTTTTCCAGTAAGAGTCTTCACAAAAATTTGCATT 1364386 >seq453 Length=4956680 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||| |||||||| ||||||||||||||||||||| ||||| ||| ||| Sbjct 4254961 CTCCCCGACGGGGAGTCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCGCTA 4254902 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 4254901 TACTATCGAGGAT 4254889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571772812386480